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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Edem2-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTTSSESFV RGQRLMLIFL VAMCIVVACV LSTETTMPTQ NMSNKERAEL REEARDMFYH  60
   61 AYNAYMQNAY PADELMPLSC KGRYRGVTPS RGDMDDILGN FSMTLVDTLD TLVLLGDFTE 120
  121 FDHAVKLVIR DVQFDSDIIV SVFETNIRMV GGLLSAHILA EYLQKHADTM HWYKGELLEM 180
  181 SRELGYRLLP AFNTSTGIPH ARVNLRLGMK DPMLKKSRET CTACAGTILL EFAALSRLTG 240
  241 DPIFEVRAHA AMDALWKLRH RGSDLMGTVL NVHSGDWVRR DSGVGAGIDS YYEYLFKSYV 300
  301 LLGDDKYLAR FNRHYNAVMK YVSEGPMLLD VLMHRPHAKS KNFMDSLLAF WPGLQVLSGD 360
  361 LKPAVQTHEM LYQVMQMHTF IPEAFTVDFQ IHWGQHPLRP EFIESTYFLY RATGDHHYLQ 420
  421 VGKKALKTLQ QHAKVSCGYA AVNDVRTGKH EDRMDSFVLS ETIKYLFLLF SDPQDLIINV 480
  481 DEFVFTTEAH LLPLSIAQLG NATFSFRQTD EHNVLDFMRT CPSSNRLFPE KVRKPLRNFI 540
  541 TGSCPRTTAG KRLSALDFQA SNADHLRAVY DMGITMVSVG DRSQGKVRLF HSFYNAKSHE 600
  601 EGEMGLQFMQ EMLELTKMQS INQLAQLQAV AYATDENSQD WIALMAGPSH FSPELTGDQF 660
  661 VEGDVILAKP LRACDESLEN AEEAKGKVLV AERGDCTFVS KARLAQKVGA AALIVCDNVP 720
  721 GSSGETQPMF AMSGDGKDDV LIPVVFMYSM EFGKLSAVMQ RRKQPLRVRV MQMVEFKRWQ 780
  781 LAKEQRQNQT ASVAQKPEKE L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle