YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0309444, CG1...
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Non-Cytoplasmic	1	46	0.49
Transmembrane Helix	47	66	0.58
Cytoplasmic	67	73	0.72
Transmembrane Helix	74	92	0.94
Non-Cytoplasmic	93	99	0.70
Transmembrane Helix	100	119	0.84
Cytoplasmic	120	134	0.75
Transmembrane Helix	135	154	0.80
Non-Cytoplasmic	155	163	0.70
Transmembrane Helix	164	185	0.83
Cytoplasmic	186	234	0.72
Transmembrane Helix	235	256	0.71
Non-Cytoplasmic	257	269	0.78
Transmembrane Helix	270	290	0.91
Cytoplasmic	291	298	0.71
Transmembrane Helix	299	318	0.96
Non-Cytoplasmic	319	325	0.71
Transmembrane Helix	326	349	0.91
Cytoplasmic	350	356	0.80
Transmembrane Helix	357	379	0.90
Non-Cytoplasmic	380	394	0.80
Transmembrane Helix	395	418	0.87
Cytoplasmic	419	432	0.88

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSWLKISLL LCTFGFFREF RPSEPYVTEY LASDYGNLTT DQIYQDVYPF GTYSVLAQLV  60
   61 IVFLITDLVR YKPVIVLSAL AGITLFSMLI WTETVGMLQV AQVFFGTFTA AEVAYYTYMY 120
  121 AKVNKEQYQV VTGHTRAAIL SGKFLGGLFA QILVSTDSMD YRQLHYLSLA TQLISLAVSL 180
  181 FLPSVPRSLY FYAGSEKITI ADGEETSPKF SFANACRLLW YHLVSSYSNP VVLQWSIWWA 240
  241 LATCGQVQVI SYIQFLWKEV APNKLSVYNG GVEAVATLLG AIGAILAGLL NSNKRRGSYM 300
  301 MGISICAAAL GALLIYAAKT QLIWVAYVNY VLFCTVFFFI ITVAGAVVAE NLVEDSFGLI 360
  361 FGINTLVGLI LQTILTVAVV ERVGFALEPR DQYVVYGSYF VVLGGISIIG SICVKLFCRT 420
  421 NKSSVENVVS LT