YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0305304, CG5...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.98
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYFIASLLLI VPIAFGSAPV TSSPPVLVWG VDTPKATSIF QPVTTAQFRK IIRNLQKNNM  60
   61 IVIYLASELA AKDINCDLCF PYLTKIQPMN YYSQVEEPLN AVERVAEKTG DIIWHIPKIS 120
  121 EMGSLEAEME LPCQKGEIHA FSFNDRNLLA HDAAMAVATY QFSDCPVVHV YTAYTEEDKA 180
  181 LQRRKSQKTQ HMSIKNKIDG QPSNSDTEVE LQPHQISQSQ ADNMTVLRNE MIVLTFRSIL 240
  241 LATKEQRSVL SPFNRTEVML AQGREPLQVG LLNSHDIFGG IVMVLNTELG PLIVELIPSQ 300
  301 GNWYLTRMIF MNNTHYPRDL YFYGFEFSLC CTDITVYSSE ASRLSFFDFH LDILWQDKDN 360
  361 GLDLQYEVKP CWNCSILMTP TMAQTIFVVL IIAAILWMGL AILLSIGQNQ LMQNANDPDL 420
  421 HIKTDT

Type	Start	End	Confidence
Signal Peptide	1	22	0.93
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	384	0.92
Transmembrane Helix	385	406	0.92
Cytoplasmic	407	426	0.78