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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG31860-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKIPDIDII PRKSSESVRE KESTGNVLKK NHDERGSQTG DGKDTTSKTR QKKLESDDSW  60
   61 AALLRKRFAW TKDNKTDAVN QNIPNTKGSS KDFTENKGSG NKHSTVTSNE KLIRSEYYEN 120
  121 SQTKSDAIKS LSNNQLSEES PEFLNKLRRI EEASKPKTWK RPTPVVLKSN QNYSANKNSE 180
  181 NALDAKPQTA TNTEETHGCI NILKVPFQSN LYYVPEKPSR QDKGSGTSDF QPGAPETPIV 240
  241 ENSAVDSDRK AVEIMPENVK NSEEKKIDNS DSTKTVTITG HSHITAKWDG HCHFKERETG 300
  301 VDKAARRVLI IACILCTIFL ILEVIGGILS NSLAIATDAA HLLTDLASFL ISISALHLAG 360
  361 RPSSERLNYG WHRAEVIGAM VSIFFIWVVT GILVYMAIMR WVNQDFELDA KIMLITSALA 420
  421 ILFNVIMAMQ LQHGHSHSLP GVHKMSKDAG SVLGSKMILL LGKSVSMQYA AKGHENINVR 480
  481 AAIIHVVGDI IQSFGVFVAA LIIFFWPEWA FMDSVCTFVF SVLVLVVTFK ILRDVLMVLM 540
  541 EATPDFMDYE EVKQTFLSIS GVEHVHNLRI WALSINKVAL SAHLAISKDA DPQLILEEAT 600
  601 TLIHKRFKFF ETTIQIEEYS PGMENCGQCL SPSDKSGKRK SSDPEKGEGK AGRKRGSDVG 660
  661 KIKNHSGSE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle