YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0312092, FBp...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	42	0.98
Transmembrane Helix	43	66	0.89
Non-Cytoplasmic	67	76	0.77
Transmembrane Helix	77	98	0.92
Cytoplasmic	99	107	0.87
Transmembrane Helix	108	131	0.84
Non-Cytoplasmic	132	160	0.92
Transmembrane Helix	161	181	0.93
Cytoplasmic	182	190	0.87
Transmembrane Helix	191	212	0.93
Non-Cytoplasmic	213	230	0.91
Transmembrane Helix	231	251	0.90
Cytoplasmic	252	264	0.94
Transmembrane Helix	265	287	0.93
Non-Cytoplasmic	288	311	0.89
Transmembrane Helix	312	332	0.90
Cytoplasmic	333	358	0.81
Transmembrane Helix	359	378	0.92
Non-Cytoplasmic	379	384	0.80
Transmembrane Helix	385	406	0.92
Cytoplasmic	407	416	0.91
Transmembrane Helix	417	438	0.92
Non-Cytoplasmic	439	445	0.83
Transmembrane Helix	446	465	0.95
Cytoplasmic	466	500	0.98

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDRYANGVT TSLVEPTNGC AAPGNPNPAD GEEKIVLKRK LTLINGVAII VGTIIGSGIF  60
   61 IAPTGVFIYT ESVGSSLLIW LTCGILSTIG ALCYAELGTC ITRSGGDYAY LLVSFGPLVG 120
  121 FLRLWIALLI IRPTTQTIVA LSFAHYAVKP FFPECDPPQN AVKLLAAICL TLLTTINCLS 180
  181 VKVSMKVQDV FTVGKLLALI MIILSGLYYM ATGELENFRN PWEGIYTARN IGYAFYSGLF 240
  241 AFGGWNYLNF VTEELQDPYK NLPRAIWIAM PLVTSIYVLV NLAYFAVVNK PEMLSSLAVA 300
  301 VTFGNRVFGP LAFMVPIFVA LSTFGGVNGV LFTSARLFAT GAQEGHLPKF FQLFHVKQQT 360
  361 PIPSLIFTCL MSLLMLLTDN VYQLINYFSS VLWLSVVASI AGMLWLRHKR PDLPRPIKVH 420
  421 LALPITFMVS CVTLVLLPNL EEPQNLLIGI GITLAGIPFY YAFIARKKKP KCYGRLSNSV 480
  481 VEICRAIFNT TIIESNEAIN