YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Rh5-PA, FBpp0309539
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHINGPSGPQ AYVNDSLGDG SVFPMGHGYP AEYQHMVHAH WRGFREAPIY YHAGFYIAFI  60
   61 VLMLSSIFGN GLVIWIFSTS KSLRTPSNLL ILNLAIFDLF MCTNMPHYLI NATVGYIVGG 120
  121 DLGCDIYALN GGISGMGASI TNAFIAFDRY KTISNPIDGR LSYGQIVLLI LFTWLWATPF 180
  181 SVLPLFQIWG RYQPEGFLTT CSFDYLTNTD ENRLFVRTIF VWSYVIPMTM ILVSYYKLFT 240
  241 HVRVHEKMLA EQAKKMNVKS LSANANADNM SVELRIAKAA LIIYMLFILA WTPYSVVALI 300
  301 GCFGEQQLIT PFVSMLPCLA CKSVSCLDPW VYATSHPKYR LELERRLPWL GIREKHATSG 360
  361 TSGGQESVAS VSGDTLALSV QN

Type	Start	End	Confidence
Non-Cytoplasmic	1	52	0.86
Transmembrane Helix	53	77	0.89
Cytoplasmic	78	88	0.85
Transmembrane Helix	89	110	0.89
Non-Cytoplasmic	111	125	0.91
Transmembrane Helix	126	147	0.92
Cytoplasmic	148	165	0.82
Transmembrane Helix	166	186	0.86
Non-Cytoplasmic	187	217	0.93
Transmembrane Helix	218	239	0.91
Cytoplasmic	240	279	0.98
Transmembrane Helix	280	303	0.90
Non-Cytoplasmic	304	382	0.70