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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG12602-PA, FBpp...
Protein type: Transmembrane
Type Confidence: 0.56
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDMFRSEKM ALCQLFIQPE AAYASIAELG EKGCVQFRDL NEEVSAFQRK YVNEVRRCDD  60
   61 MERRLRYVES EMKKDEVKLP VLRPEEEPIA PNPREIVDLE AQLEKTDNEL REMSANGASL 120
  121 DANFRHMQEL KYVLENTEGF FSDQEVINLD VNRKLDPEDP ANLPGAAQRG QLAFVAGVIK 180
  181 LERFFSFERM LWRISRGNIF LRRADIDGLV ADEETGRPVL KTVFVAFFQG EQLKQRIKKV 240
  241 CTGYHAAVYP CPSSHAERKE MIKDVNVRLE DLKLVLSQSA DHRSRVLNSA SKHLPRWSIM 300
  301 VRKMKAIYHI LNFFNPDVTG KCLIGEGWVP TNDISTVQDA LARASKISES SIPAFMNVIE 360
  361 TNEMPPTYTR TNKFTNGFQN LVDSYGMASY REVNPALYAC ITFPFLFAVM FGDLGHGLIL 420
  421 LLFASWLIIK EKQLSSIKEE IFNIFFGGRY IIFLMGIFSI YTGFIYNDVF SKSMNIFGSA 480
  481 WHMNYTRDVV EDENLKYITL RPNDTVYKTY PFGMDPIWQL ADNKIIFLNT FKMKLSIIVG 540
  541 VIHMIFGVSM SVVNFAYYKK YASIFLEFLP QVLFLLLLFG YMVFMMFFKW VVYNDTVEGP 600
  601 LSPACAPSIL ILFINMILQG SQDTPEPCKE FMFDGQKSIQ QVFVVVAIIC IPWMLLGKPL 660
  661 YIMIKRKTNG APPPKPQSGG GEGHGEDDEM GEIFIHQAIH TIEYVLSTVS HTASYLRLWA 720
  721 LSLAHAQLSE VLWNMVFSMG FKYDSYIGGI LIYVFFGAWA LLTVGILVLI EGLSAFLHTL 780
  781 RLHWVEFMSK FYEGAGYAFE PFAFKTILDV SEDD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle