YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Ppt2-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLRLQVLVA LLTCSSISVS LAYKPVVILH GILSGAESMA SLVREIEEFH PGTIVYNCDK  60
   61 FNGWYSLENA WRQVDQVRDY LNEVGKLHPE GIIVLGYSQG GLLARAAIQS LPEHNVKTFI 120
  121 SLSSPQAGQY GTSFLHLIFP DLAAKTAFEL FYSRVGQHTS VGGYWNDPQR QDLYLKYSEF 180
  181 LPLINNEKKT SNSTSFKMGM VRLNKLVMIG GPNDDVITPW QSSHFGYFDE NMDVIPFIRR 240
  241 PIFTSDSIGI RTLQEAGKLI IVVKPHVHHL AWHTRRDVIH EVIFPYLD

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	288	0.99