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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Ge-1-PA, Ge-1-PB
Protein type: Globular with Signal Peptide
Type Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIALFALAH LPIFRKTPLS ASSSPPPSVH RSPRCGKAST AYHPPPADAC ISITASAIDA  60
   61 ASGMSNSAEQ DKPIAANGNA AEPQEIEVIH FQAQEKQCCR VIRSNKTKVL TSGGVHTRGS 120
  121 SKVKLKNIVD YKWERKYYYP GHLVAVHRDG KHLAYAINVN NKATGMEGMV RVCNIATSMR 180
  181 ALIKGMSGEV LDLQFAHTDC ERILAVIDVS SLFVYKVDQI EGNLLCNLVL KVEDPIANYV 240
  241 PEYDMVSWCP YVCSSSATVP INDDDDENQL LIWSRSSQFQ CFQVKMIVSE HGRGKIQPAA 300
  301 LESGYLKIEE DSLITCAALS PDGTTVAAAC ADGLVRFYQI YLFDVRNHRC LHEWKPHDGK 360
  361 KVCSLFFLDN INKPVEESYW QHVITTSDAN TEIKLWNCSL WKCLQTINVV ASPSSLQPRN 420
  421 FIAGIDRSAN YLVLSCLDSL AVYVMQIGST GGADSENRSS DSEGEGCDTS KRIQNVAEFK 480
  481 LSSGILSFSI VNASMRRVKN SIESYYPIEE PDDFDDDSNS TSALVLHMFV VQAKSLQECQ 540
  541 IIYQPCVAEK TERSSLNSKR SQTPEDNLLI KEEPESPNSG TVGAVQLDAL FAKSAKRAST 600
  601 GSSSAMVAVA AAAAAAPSAI LQDATKEAAK SESPQLSSAY TQQVNLMTPD AFSASGTAAA 660
  661 AAVFVSTSTT TSIGTDSSTT TSGQDRSIDS AVLQTIRMLA TVTSKTSENP NAEVLLNLMN 720
  721 NTLIEDREQQ KLKEKLDARK KFIAIDRNPE RNVAENLASG SSSPSREVQE IMATQDDADA 780
  781 YEAELENLDD DDDDEEEELA NSSPLPEAVD GTWPIVKLSS HSAELQNAAQ IMSQAVQNTN 840
  841 NGNVPPTLGG GHNNNTSVGS NSNNNTATTL STSNTSSSNN AGGTCVDSSG TGELNAKMEL 900
  901 LIDLVKAQSK QINKLENEVN KLQKQQEAAA ALHSKQDTSL EPKNLSQLAY KIEMQLSKLM 960
  961 EQYLKRYENE HKKKLTEFLA ARESQNRELR DSVLQVLNQY VMNHFTDIIG NVLNMELQRQ1020
 1021 LLPRVNANMD QLQAQMQVEI VQKLSVFDKT VKENIAQVCK SKQFLDTFGK SVLIGVQTSL1080
 1081 QTAFIESMSS TLIPAYEKSS QNMFKQLHDA FSVGIKDFMV QFNTYLQHMP QPQAGSGNTE1140
 1141 EINNKLSMLK QLVESSLHKH RTELTDAMLE TQREVKSLEI LLARQVQETI RAELRKHMEA1200
 1201 QNVAMRSQAA TPAPPYDLRD SIKQLLMAGQ INKAFHQALL ANDLGLVEFT LRHTDSNQAF1260
 1261 APEGCRLEQK VLLSLIQQIS ADMTNHNELK QRYLNEALLA INMADPITRE HAPKVLTELY1320
 1321 RNCQQFIKNS PKNSQFSNVR LLMKAIITYR DQLK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle