YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG6737-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMDYYLPVY NGSNSVDVPG LIESLKLKET SISPIVLDRY PPYSPFYGVM GVVFSSVLTS  60
   61 AGAAYGTAVS GTGIAATAVM RPELVMKSII PVVMAGIIAI YGLVVSVLLS GELAPAPKYS 120
  121 LPTGYVHLAA GLSVGFAGLA AGYAVGEVGE VGVRHIALQP RLFIGMILIL IFAEVLGLYG 180
  181 LIIGIYLYTV NIK

Type	Start	End	Confidence
Non-Cytoplasmic	1	45	0.63
Transmembrane Helix	46	76	0.71
Cytoplasmic	77	87	0.56
Transmembrane Helix	88	110	0.89
Non-Cytoplasmic	111	123	0.61
Transmembrane Helix	124	146	0.90
Cytoplasmic	147	161	0.63
Transmembrane Helix	162	187	0.87
Non-Cytoplasmic	188	193	0.61