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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RluA-1-PB, RluA-...
Protein type: Globular with Signal Peptide
Type Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNSPAPCAW YLPWSLAAQQ HQQKMLQMQS PFLDKMGATS VGGIFAGQPQ MQQQLSPNTA  60
   61 AAPPANYQQP ALHPSAAPGA PHFHMGSPYS HLAPQLLNAG QLNQNALMHS AMFSSLPLGA 120
  121 YYAPAAGAGH SAFGGVPLTT AAQQSLLAAT GGATAGHLAN QQTTAQVPVQ VPVQMAQRTA 180
  181 PAACSMVQPL NCLPHQELNH LSSINLNLLR SPAPPLPAIQ VLPSAEVPIN KKTTSPRDSE 240
  241 NLKIKVPEKR KTDDNDQIKE LKKAKLETKA LKAKRPGFTD ERYQETSYYM ENGLRKVYPY 300
  301 YFTFTTFTKG RWVGEKILDI FSREFRAHPA EEYERCIQTG TLTVNFEKVP IDYRLKHNDL 360
  361 LANIVHRHEV PVTCQPIKIV HMDEDIVVVN KPASIPVHPC GRYRHNTVVF ILAKEFNLKN 420
  421 LRTIHRLDRL TSGLLLFGRS PKKARQMEQQ IRNRQVEKEY ICRVEGVFPD GIVECKEPIE 480
  481 VVSYKIGVCK VSAKGKDCTT TFQKLSQNGT TSVVLCKPLT GRMHQIRVHL QYLGYPILND 540
  541 PLYNHEVFGP LKGRSGDIGG KSDEELIRDL INIHNAENWL GIDCDSDISM FKSTKDEADR 600
  601 ESLSSEHTSV VHHSDDDGCV NSRETTPPCN EPQQPENSVK LLETTNAVKE YQVAAQKSSS 660
  661 EICPAPLDAV ESPLNGGGCN VGKVTVDEHC YECKVHYRDP KSKDLIMYLH AWKYKGPGWE 720
  721 YETELPNWAR NDWDHLDSA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle