YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG5091-PA, FBpp0...
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	6	0.71
Transmembrane Helix	7	26	0.54
Non-Cytoplasmic	27	74	0.68
Transmembrane Helix	75	93	0.48
Cytoplasmic	94	108	0.79
Transmembrane Helix	109	131	0.80
Non-Cytoplasmic	132	162	0.80
Transmembrane Helix	163	186	0.76
Cytoplasmic	187	229	0.68
Transmembrane Helix	230	252	0.84
Non-Cytoplasmic	253	294	0.62
Transmembrane Helix	295	316	0.85
Cytoplasmic	317	321	0.65
Transmembrane Helix	322	343	0.88
Non-Cytoplasmic	344	384	0.69
Transmembrane Helix	385	403	0.87
Cytoplasmic	404	416	0.87
Transmembrane Helix	417	438	0.90
Non-Cytoplasmic	439	444	0.85
Transmembrane Helix	445	467	0.90
Cytoplasmic	468	475	0.93

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSEILASAF LGLAVRSIIS LYSYSGFDSP PMHGDYEAQR HWQEITVNLA VGEWYTNSSN  60
   61 NDLQYWGLDY PPLTAYHSYL VGRIGASIDP RFVELHKSRG FESKEHKRFM RATVVSADVL 120
  121 IYLPAMLLLA YSLDKAFRSD DKLFLFTLVA AYPGQTLIDN GHFQYNNISL GFAAVAIAAI 180
  181 LRRRFYAAAF FFTLALNYKQ MELYHSLPFF AFLLGECVSQ KSFASFIAEI SRIAAVVLGT 240
  241 FAILWVPWLG SLQAVLQVLH RLFPVARGVF EDKVANVWCA VNVVWKLKKH ISNDQMALVC 300
  301 IACTLIASLP TNVLLFRRRT NVGFLLALFN TSLAFFLFSF QVHEKTILLT ALPALFLLKC 360
  361 WPDEMILFLE VTVFSMLPLL ARDELLVPAV VATVAFHLIF KCFDSKSKLS NEYPLKYIAN 420
  421 ISQILMISVV VASLTVPAPT KYPDLWPLII SVTSCGHFFL FFLWGNVQQF SSKLS