YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG31873-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYLRVIRNN WKKCTFGAAV SVYALQALKT HIEIEQHMRE FASNIQANWI SDRPKKVLVV  60
   61 MNPVANKKRS EKFFKNYCEP VLHLAGYSVE ILRTNHIGHA KTYVEELATL PDAIVVAGGD 120
  121 GTSSEVVTGL MRRRGNLCPI TILPLGRSVQ SASKRINIFG VKDVDYVKSL SKALEPMLKD 180
  181 ESQYQSVIRF DVINEEDGSN SQLKPIFGLN GLSWGLLEDI DAAKDKYWYF GPLRHYASAA 240
  241 SKSFADNWSL KTDYVYTPPC PGCVDCAATV QRQETAQPSG LFTRGLIKYK NNPGETKRPL 300
  301 VKNDNCSKKF EGSAEASQIN INCVQNKDNF AELESQFISS LQPGWEFIKQ IPEVTCSKIL 360
  361 PSLVVKSRTI QLHPDGEMGE KFYSIDGEEY DARPIKVSVV PNAIKVFC

Type	Start	End	Confidence
Signal Peptide	1	27	0.67
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	408	0.99