YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|220943728
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSANEMALVK ICIFALALAV GLTATKAQES RGGFRGSNSQ FRVGPGHPPS QRHLPPRNRD  60
   61 PVQEASVVPK SKQTAAEKEY EPTEECPEPN GFYPDSKQCD KYYACLDGVP TERLCADGMV 120
  121 FNDYSPIEEK CDLPYNIDCM KRSKLQTPQP SLHCPRKNGY FGHEKPGICD KFYFCVDGQF 180
  181 NMITCPAGLV FNPKTGICGW PDQVGVTGCK SEDVFDFECP KVNESIAVTH PRYADPNDCQ 240
  241 FFYVCVNGDL PRRNGCKLGQ VFDEEKETCD WARKVPDCAD WYKDRLTDKE LDELENPKPK 300
  301 TTTTKRPPRV RGQSRRKPQP KRVEPEQVKE EEEEEEE

Type	Start	End	Confidence
Signal Peptide	1	27	0.98
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	337	0.99