YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GlcAT-S-PB
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSARLLESQ TSDEDNEDIE RRPHQSHSRS CSNNTTPTHP PHPMVRKGGV ARRICLIGGA  60
   61 LFLLLVALCY LTLSGDTRLG GSEDSEEGSH HGLDSMNFRP LNETVHICSE SYEDRRQFMQ 120
  121 DKPQSDYVQL PVIYFVTPTY PRREQIPELT RLAHTLLHIP RLHWLVADDQ EKCNDYMDTL 180
  181 LYRFGMPFTH MVSPMPSKFR NEKPAPRGVA NRRAALQWIR QHNLTNGILY FGDDDNTYDL 240
  241 RLFSEIRKTQ RVSMFPVGLI ADYGVSGPVV RKGKVVAFLD SWVAGRRWPV DMAGFAVNLE 300
  301 YMAQYPYVNM PYKPGYEEDL FLRSIGLQMN LIEPRGNNCT EILVWHTQTK SKKLGMVRLE 360
  361 SKYLDDRSNL GALLHNLKLM GVTSTTESEG RNALISKNGR ENPHSKILS

Type	Start	End	Confidence
Cytoplasmic	1	53	0.95
Transmembrane Helix	54	73	0.94
Non-Cytoplasmic	74	409	0.99