YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG9582-PA, FBpp0...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.35
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATRSEETVR SLAHWQFLAG GLSGFIEIIC FHPLDVVKTR MQIQGAHPFG GEVVYTCPLD  60
   61 AIVKIYRYEG LSSLWKGIVP PICVETPKRG GKFLMYESLK PYFQFGAPQP TPLTHAMSGS 120
  121 MAAILESFLV NPFEVVKITQ QAHRGKRLKT LSVVKYIIKH DGYGIKGLYR GITALVARNA 180
  181 VFHFGFFGFY NALKDIVPSP EDKTYNILRK VIIAGLASSL ACVMSVTLDM AKCRIQGPQP 240
  241 VKGEVKYQWT ISTIKSTFKE EGFRSLFKGL GAMILRVGPG GAMLLVTYEY LFEFLKSQNI 300
  301

Type	Start	End	Confidence
Cytoplasmic	1	11	0.66
Transmembrane Helix	12	34	0.74
Non-Cytoplasmic	35	112	0.51
Transmembrane Helix	113	130	0.35
Cytoplasmic	131	173	0.75
Transmembrane Helix	174	190	0.60
Non-Cytoplasmic	191	206	0.69
Transmembrane Helix	207	228	0.65
Cytoplasmic	229	271	0.74
Transmembrane Helix	272	292	0.71
Non-Cytoplasmic	293	300	0.79