YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0309216, fu1...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACTCEVIGL ACVVALILSA TAKAPYQMRM FFIFFGAGLI VFLCVPFMIL RPRDYRNALF  60
   61 PSWCFRQLCR LVGITMEVRG LENVRKDHGA VVIMNHQSAV DLCVLAYLWP VIGRATVVSK 120
  121 KEVLYIPFFG IGAWLWGTLY IDRSRKTDSI NSLQKEAKAI QERNCKLLLF PEGTRNSKDS 180
  181 LLPFKKGSFH IALQGKSPVQ PVVISKYSFM DDEKKTFRPG HALIHILPEV STEKYKREDV 240
  241 QLLIDECQSI MQTEYTKLSK EGQALSSKKQ A

Type	Start	End	Confidence
Cytoplasmic	1	6	0.77
Transmembrane Helix	7	24	0.72
Non-Cytoplasmic	25	30	0.58
Transmembrane Helix	31	50	0.96
Cytoplasmic	51	122	0.64
Transmembrane Helix	123	141	0.78
Non-Cytoplasmic	142	271	0.60