YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|220954018, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWTCLCQLCF YLLSTLAVAA LSIAALVLYK TKPYPNIKRH KDEETFLDPH TIKTVTFPSL  60
   61 EDSPSLELSV IVPAYNEEQR LPSMLDECLA FLEQKSAGTP NFTYEVIVVS DGSQDATVSV 120
  121 ALGYSKKHGA EKVRVLELIE NRGKGGAVRM GMLSARGRNL LFADADGATK FPDYDKLEVA 180
  181 LKQLAPEWRD DGIAIGSRAH LENDAIATRS FFRTILMHGF HFLVWLFAVR SIRDTQCGFK 240
  241 LFTRTTARKL FTSLHVERWA FDVELLYLAE NLKLPMSEVA VRWTEIDGSK LTPFWSWLQM 300
  301 GRDLFMIWVR YLVGAWRIAS IQKKEK

Type	Start	End	Confidence
Signal Peptide	1	24	0.88
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	326	0.92