YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0310052, CG7...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	50	0.78
Transmembrane Helix	51	71	0.92
Non-Cytoplasmic	72	84	0.79
Transmembrane Helix	85	104	0.89
Cytoplasmic	105	123	0.77
Transmembrane Helix	124	144	0.71
Non-Cytoplasmic	145	151	0.62
Transmembrane Helix	152	171	0.81
Cytoplasmic	172	182	0.74
Transmembrane Helix	183	203	0.89
Non-Cytoplasmic	204	216	0.71
Transmembrane Helix	217	237	0.86
Cytoplasmic	238	256	0.81
Transmembrane Helix	257	278	0.91
Non-Cytoplasmic	279	288	0.82
Transmembrane Helix	289	308	0.95
Cytoplasmic	309	317	0.83
Transmembrane Helix	318	338	0.91
Non-Cytoplasmic	339	351	0.82
Transmembrane Helix	352	373	0.66
Cytoplasmic	374	415	0.72

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGCMRYLSEA HLRGFERYKY SSIDTSFLSV YVMHPFWNYC VKFVPKWLAP NVLTFVGFLM  60
   61 TVVNFILIAY YDWGFEAANS ETGNTVPAWV WTVAAINILI YYNLDGMDGK QARRTGTSGP 120
  121 LGELFDHGLD SYSAALIPIY LFSLFGTHDL PPIRMFFVIW NVFLNFYLTH VEKYNTGVMF 180
  181 LPWGYDFTMW GVSGMLFVAT VFGPEMYRFS IYGFTMANMF EFVLIGSGMV SSHPIIARNI 240
  241 YLSYKNKTGK MRPMWEMLRP FFAFVWLFVI TVVWSFFSRN DVINKEPRIL WILYGTIFSN 300
  301 IACRLIVAQM SDTRCDAFNV LMWPLAATVG VCCFPYYQQV FDSDLTSDTE RWILYGLTIF 360
  361 STLAHWHYGY GVVSEMCDHF HIRCFKVRKS SSQSGSDITQ PLLQNNNKIK PLKSH