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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TepIII-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLQGADMGA IPVLILVTAC LLCQTSAQGL YSIIAPNTLR PNSQFHVAVS LHNAPESATF  60
   61 KVGILGSSYT DFKTVELRPF STQLLHFEIP ALRTDRYRLT AEGLGGVQFT NETQLHFESK 120
  121 QHTVLVQTDK SIYKPGDLVH YRVLILDANL KPARGYGRVH VDIKDSGDNI IRSYKDIRLT 180
  181 NSIYSNELRL SDSPRFGTWS IVVDVSDQEH TQTFEILDHI LPKFVVDIDT PKHAIYKDGK 240
  241 IAATVRAHYA FGQPIVGEAT LSIYPTFFGS LQPFVNDLIT RKVVPIDGNA YFEFDIENEL 300
  301 HLKQDYERQY LLDALVEEKS TGSVQNYSTV LTLHLNHYRV EAVKVPSYYI PGVPFEATAR 360
  361 IARNDGGQLR DFNPQITAYL TNVYGSSEMY NRTAYSLDAS GEIKMKFTVP IGDRDEFHSI 420
  421 IVDYQGVISE VGKIPSKHLH SKNYITAKVL NDRPTVNQEI SVVVRSFAPI KYFMYQVVGR 480
  481 GDIILSRNVD VAPGTFHTIK FLASFAMMPR ANLLVYTVID GEFVYDEQVI QLEENLLNAV 540
  541 QVDAPIRAPP GQDIDIGIST KPYSYVGLML VDQNANDLRS GHDLTHKRLM DALRSYELSD 600
  601 VNTPMGSPGK ESGVITMSNT DYFIEKEAES NPALDREVST GPEEDKLTTV RKTDIGPAHK 660
  661 IEVNTLPPGK GRYAFSYTPK PFWHNPRVHV MRDPADTWLF LNISASSDGR NSIHRRIPSE 720
  721 MTSWVVSAFA LDPVNGLGLS PPNGKLEAYK EFYISTELPY SIKRDELIAI PFVVHNNRDS 780
  781 DLNVEVTFYN SALDFDFPQL DPKATNQPKV ELYRRRSLQV PGRSARSVSF IVTPKRVGPL 840
  841 LVKAMAASSQ AGDTVEQNLL VEHPGAMERI NRGFLFELNS NAQNRRNVTI AVPRNAIPES 900
  901 TRIEVSAVGD LIGSLVGNLD SLILLPTGCG EQTMVNFVPN LIVLRYLGRL RQLTPEVELR 960
  961 ATNNLAIGYQ RILYYRHENG AFSAFGLDIK RSSTWLTAYV ARSLRQAAPF TQVDSNVLQK1020
 1021 ALTYLGSVQS ANGGFEERGD VFERFGDDGI SLTAFVTLAL MENVDLYPEY RNNINKALDF1080
 1081 ITRGLDGSSN LHAMAIGTYV LSRANHNAKA AFLQRLDSMA TNKDGLKWWN KTAPAGEQQS1140
 1141 PWYNATRSVN IEISAYAALA LLENNLVGDA LPVLNWLMDQ RNPKGGFVAS QDTVVGLQAL1200
 1201 LMFAERFSSQ GNNLQIGFHY GEGAETIINV NAENSLALQT VELPNNLKNL SVSATGRGMA1260
 1261 LAQVSYTYNT NVTSAWPRFV LDPTVNRNSH ADYLHLSACA SFVSVVGENE QRSNMAVMEV1320
 1321 HLPSGFVVDR DTLPTLESSE RIKKVETQNR NTKVVIYFDY LDRREVCPTL HAYKTVKVTK1380
 1381 HRPVAVVMYD YYDSARRARQ FYRAPKSNIC DICEHANCGD LCEKAEKRES KRPDDYTAIA1440
 1441 GHSSGSRHTA IPLASVVMVL SMLLKTLSC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle