YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TepII-PC
Protein type: Globular with Signal Peptide
Type Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRIFLTGII LQYALLVNAT GIYSVVGPGT LRSNSKYNVV VSVHKADGPS QIKVSLNGPS  60
   61 YNETKQIELP PMSTQNVEFE VPKLATGNYN LSAEGVSGVV FKNSTKLNYA DKKPSVFVQT 120
  121 DKATYKPADL VQFRILFLDE NTRPAKIEKP ISVIIIDGAQ NRIKQLSDVK LTKGVFSGEL 180
  181 QLSEQPVLGT WKISVSVDGD NRETKSFEVD KYVLPKFEVI VDTPKAVVIA DKVIKATIRA 240
  241 KYTYGKPVKG KATVSMERSY GYFGDLNANG NKQEKTIDVD GKGHVEFDII HWAQRGQYLP 300
  301 PIKLFAVVTE ELTGNKQNAT ATVVLHQQRY SIEPYERPEH FEANKSFIYQ VVVKNVDGSP 360
  361 VTNSAKNVKI GFDKSYSYFH EPSPKTRINF EAPVNENGIA TFNVRLPDSD SRYYRIFASF 420
  421 DGSENTIGSI SKFEPTPMSR EPLKIQVNTK KPRLGEQVSF DVVSIEDLPY FVYTIVARGN 480
  481 VILSDYVDVP DGQKTYTVKF TPTFSMVPKA TIYVYYVVNN DLQFEEKTID FEKEFSNSID 540
  541 VSAPTNAKPS EEVKLRIKTD ADSFVGLLGV DQSVLLLKSG NDLSQDDIFN SLNIYQTSTP 600
  601 WMNGYGRYPG QTSGLVTLTN ANYPYNTEFP IAFSLAAPQA AIAGMPGTSS IASHPNQAPQ 660
  661 IRKEFPENWI FYNAENVGEE EFTLTKKIPD TITSWVVTGF SLNPTSGIAL TKNPSKIRVF 720
  721 QPFFVSTNLP YSVKRGEVIA IPVVIFNYLD KTLDADVVMD NSDQEYEFTE ATNEVLEKAI 780
  781 DEVRRVKRVT IPANSGKSVS FMIRPKNVGF TTLKITATSA LAGDAIHQKL KVEPEGVTLF 840
  841 ENRAVFINLK DQPEMSQSLD ADIPNEVVPQ SEFIEFSVVG DLLGPTLQNL DNLVRMPYGC 900
  901 GEQNMVNFVP NILVLKYLEV TGRKLPSVES KARKFLEIGY QRELTYKHDD GSYSAFGKSD 960
  961 ASGSTWLTAY VMRSFHQAGT YTDIDPKVIT AGLDFLVSKQ KESGEFPEVG KLFDNANQNP1020
 1021 LALTSFVLLA FFENHELIPK YQSAIKKAVR YVAEEADKTD DQYSLAIAAV ALQLAKHPQS1080
 1081 EKVIAKLESV ARKENDRMWW SKATESTGED GRVFHWKPRS NDVEITSYVL LALLEKDPAE1140
 1141 KALPIIKWLI SQRNSNGGFS STQDTVIGLQ ALTKFAYKTG SGSGTMDIEF SSAGESKNTI1200
 1201 KVNPENSLVL QTHDLPKSTR KVDFTAKGTG SAMVQLSYRY NLAEKEKKPS FKVTPTVKDT1260
 1261 PNQLLIVDVC AEYVPLEDAD KDKDSNMAVM EIALPSGFVG DSTSLGKIQA VDRVKRVETK1320
 1321 NSDSTVVVYF DSLTPGDVRC LPLEASKAHA VAKQKPASVS LYDYYDTERK ATEYYQVKSS1380
 1381 LCDICEGADC GEGCKKD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle