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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TepII-PB
Protein type: Globular with Signal Peptide
Type Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRIFLTGII LQYALLVNAT GIYSVVGPGT LRSNSKYNVV VSVHKADGPS QIKVSLNGPS  60
   61 YNETKQIELP PMSTQNVEFE VPKLATGNYN LSAEGVSGVV FKNSTKLNYA DKKPSVFVQT 120
  121 DKATYKPADL VQFRILFLDE NTRPAKIEKP ISVIIIDGAQ NRIKQLSDVK LTKGVFSGEL 180
  181 QLSEQPVLGT WKISVSVDGD NRETKSFEVD KYVLPKFEVI VDTPKAVVIA DKVIKATIRA 240
  241 KYTYGKPVKG KATVSMERSY GYFGDLNANG NKQEKTIDVD GKGHVEFDII HWAQRGQYLP 300
  301 PIKLFAVVTE ELTGNKQNAT ATVVLHQQRY SIEPYERPEH FEANKSFIYQ VVVKNVDGSP 360
  361 VTNSAKNVKI GFDKSYSYFH EPSPKTRINF EAPVNENGIA TFNVRLPDSD SRYYRIFASF 420
  421 DGSENTIGSI SKFEPTPMSR EPLKIQVNTK KPRLGEQVSF DVVSIEDLPY FVYTIVARGN 480
  481 VILSDYVDVP DGQKTYTVKF TPTFSMVPKA TIYVYYVVNN DLQFEEKTID FEKEFSNSID 540
  541 VSAPTNAKPS EEVKLRIKTD ADSFVGLLGV DQSVLLLKSG NDLSQDDIFN SLNIYQTSTP 600
  601 WMNGYGRYPG QTSGLVTLTN ANYPYNTERR IFIRPGIGFP RPLFNRVTVA GSLPPNVIPE 660
  661 PQVRKEFPEN WIFNIFENVG EEEFTLTKKI PDTITSWVVT GFSLNPTSGI ALTKNPSKIR 720
  721 VFQPFFVSTN LPYSVKRGEV IAIPVVIFNY LDKTLDADVV MDNSDQEYEF TEATNEVLEK 780
  781 AIDEVRRVKR VTIPANSGKS VSFMIRPKNV GFTTLKITAT SALAGDAIHQ KLKVEPEGVT 840
  841 LFENRAVFIN LKDQPEMSQS LDADIPNEVV PQSEFIEFSV VGDLLGPTLQ NLDNLVRMPY 900
  901 GCGEQNMVNF VPNILVLKYL EVTGRKLPSV ESKARKFLEI GYQRELTYKH DDGSYSAFGK 960
  961 SDASGSTWLT AYVMRSFHQA GTYTDIDPKV ITAGLDFLVS KQKESGEFPE VGKLFDNANQ1020
 1021 NPLALTSFVL LAFFENHELI PKYQSAIKKA VRYVAEEADK TDDQYSLAIA AVALQLAKHP1080
 1081 QSEKVIAKLE SVARKENDRM WWSKATESTG EDGRVFHWKP RSNDVEITSY VLLALLEKDP1140
 1141 AEKALPIIKW LISQRNSNGG FSSTQDTVIG LQALTKFAYK TGSGSGTMDI EFSSAGESKN1200
 1201 TIKVNPENSL VLQTHDLPKS TRKVDFTAKG TGSAMVQLSY RYNLAEKEKK PSFKVTPTVK1260
 1261 DTPNQLLIVD VCAEYVPLED ADKDKDSNMA VMEIALPSGF VGDSTSLGKI QAVDRVKRVE1320
 1321 TKNSDSTVVV YFDSLTPGDV RCLPLEASKA HAVAKQKPAS VSLYDYYDTE RKATEYYQVK1380
 1381 SSLCDICEGA DCGEGCKKD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle