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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TepII-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRIFLTGII LQYALLVNAT GIYSVVGPGT LRSNSKYNVV VSVHKADGPS QIKVSLNGPS  60
   61 YNETKQIELP PMSTQNVEFE VPKLATGNYN LSAEGVSGVV FKNSTKLNYA DKKPSVFVQT 120
  121 DKATYKPADL VQFRILFLDE NTRPAKIEKP ISVIIIDGAQ NRIKQLSDVK LTKGVFSGEL 180
  181 QLSEQPVLGT WKISVSVDGD NRETKSFEVD KYVLPKFEVI VDTPKAVVIA DKVIKATIRA 240
  241 KYTYGKPVKG KATVSMERSY GYFGDLNANG NKQEKTIDVD GKGHVEFDII HWAQRGQYLP 300
  301 PIKLFAVVTE ELTGNKQNAT ATVVLHQQRY SIEPYERPEH FEANKSFIYQ VVVKNVDGSP 360
  361 VTNSAKNVKI GFDKSYSYFH EPSPKTRINF EAPVNENGIA TFNVRLPDSD SRYYRIFASF 420
  421 DGSENTIGSI SKFEPTPMSR EPLKIQVNTK KPRLGEQVSF DVVSIEDLPY FVYTIVARGN 480
  481 VILSDYVDVP DGQKTYTVKF TPTFSMVPKA TIYVYYVVNN DLQFEEKTID FEKEFSNSID 540
  541 VSAPTNAKPS EEVKLRIKTD ADSFVGLLGV DQSVLLLKSG NDLSQDDIFN SLNIYQTSTP 600
  601 WMNGYGRYPG QTSGLVTLTN ANYPYNTGPL VMSYVFEGSR HPWITRPRYR VGIRGDSGDR 660
  661 ISFLSQSLND RNLKEILLKQ TPQRTTIRKE FPETWFFENV GEEEFTLTKK IPDTITSWVV 720
  721 TGFSLNPTSG IALTKNPSKI RVFQPFFVST NLPYSVKRGE VIAIPVVIFN YLDKTLDADV 780
  781 VMDNSDQEYE FTEATNEVLE KAIDEVRRVK RVTIPANSGK SVSFMIRPKN VGFTTLKITA 840
  841 TSALAGDAIH QKLKVEPEGV TLFENRAVFI NLKDQPEMSQ SLDADIPNEV VPQSEFIEFS 900
  901 VVGDLLGPTL QNLDNLVRMP YGCGEQNMVN FVPNILVLKY LEVTGRKLPS VESKARKFLE 960
  961 IGYQRELTYK HDDGSYSAFG KSDASGSTWL TAYVMRSFHQ AGTYTDIDPK VITAGLDFLV1020
 1021 SKQKESGEFP EVGKLFDNAN QNPLALTSFV LLAFFENHEL IPKYQSAIKK AVRYVAEEAD1080
 1081 KTDDQYSLAI AAVALQLAKH PQSEKVIAKL ESVARKENDR MWWSKATEST GEDGRVFHWK1140
 1141 PRSNDVEITS YVLLALLEKD PAEKALPIIK WLISQRNSNG GFSSTQDTVI GLQALTKFAY1200
 1201 KTGSGSGTMD IEFSSAGESK NTIKVNPENS LVLQTHDLPK STRKVDFTAK GTGSAMVQLS1260
 1261 YRYNLAEKEK KPSFKVTPTV KDTPNQLLIV DVCAEYVPLE DADKDKDSNM AVMEIALPSG1320
 1321 FVGDSTSLGK IQAVDRVKRV ETKNSDSTVV VYFDSLTPGD VRCLPLEASK AHAVAKQKPA1380
 1381 SVSLYDYYDT ERKATEYYQV KSSLCDICEG ADCGEGCKKD 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle