YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG11236-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPNIAVIGAG VNGVASAIKI LEHYVNDGKT PIKVTIISED FTPNTTGDGS AGLWGPYLLG  60
   61 GTSQAKVYKW SKSMHQFLEK IWLSEDAGEA GVCLLPCIRL STSTVDTVED FWRDIVYGAV 120
  121 DLSKEQLAAY NKGRSVKFTS GLSFVTYTSE PIKLLPYLMK RFTRNGGVVV RKRITDLDAF 180
  181 VADSEYDVIV NCSGLGSKTL LNDDQMYAVR GQVSRVRANW IFSAVLDESD DGNYIIPNTE 240
  241 SVVLGGTHQE RDYNTKVCQN DRRMIVDGCQ RYIPGLEHTE CLFDWVGLRP GRTQLRLEAE 300
  301 RRGRKLLIHN YGHGGSGVTL CWGCADDVLN ILLAAKNGSK L

Type	Start	End	Confidence
Signal Peptide	1	16	0.62
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	341	0.98