YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	nrv2-PC, nrv2-PF...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTITEDCID GFQQYYSRPP ERPKKKSLKQ MVYDSEDNSY FGRSMDSWAK IGIFYVAFYG  60
   61 VLAALVAICM WAFFQTLDPR IPKWTLDRSL IGTNPGLGFR PLPPVDNVES TLIWYKGTQH 120
  121 ENYKHWTDSL DDFLAVYKVP GLTPGRGQNI YNCDYNQPPP KGQVCDVDIK TWSPCTKENN 180
  181 YSYHKSAPCI FLKLNKIYGW IPEYYNRSND LPANMPASLK TYIAEVEKTQ PEKLNTIWVS 240
  241 CEGENPADQE NIGAVNYLPI RGFPGYFYPY QNSEGYLSPL VAVHFQRPKR GIIINVECRA 300
  301 WARNIIHDRK ERIGSVHYEL LID

Type	Start	End	Confidence
Cytoplasmic	1	50	0.93
Transmembrane Helix	51	74	0.93
Non-Cytoplasmic	75	323	0.93