YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	nrv1-PA, FBpp0304646
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKNNGKGAK GEFEFPQPAK KQTFSEMIYN PQEGTFFGRT GKSWSQLLLF YTIFYIVLAA  60
   61 LFTICMQGLL STISDTEPKW KLQDSLIGTN PGLGFRPLSE QTERGSVIAF DGKKPAESDY 120
  121 WIELIDDFLR DYNHTEGRDM KHCGFGQVLE PTDVCVVNTD LFGGCSKANN YGYKTNQPCI 180
  181 FLKLNKIFGW IPEVYDKEEK DMPDDLKKVI NETKTEERQQ VWVSCNGHLG KDKENFQNIR 240
  241 YFPSQGFPSY YYPFLNQPGY LSPLVAVQFN SPPKGQMLDV ECRAWAKNIQ YSGSVRDRKG 300
  301 SVTFQILLD

Type	Start	End	Confidence
Cytoplasmic	1	46	0.92
Transmembrane Helix	47	70	0.89
Non-Cytoplasmic	71	309	0.93