YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG11050-PA, CG11...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSLQLQQLL RATASGVTSG ATKTLCTATA SAATKHSSQA KFGDNSSHGS PSHTDGRSHG  60
   61 ESESDLESAH GQNFTSHHLA RRILQQRSQD IQRHIHTQSA KGQTSAKSSQ QQQHQQTATK 120
  121 FAMSSLAAEP LQSQKSDEIT ASTGGGDVET PGLGASCHEV AAASASAGKK PCFSSGLGEI 180
  181 LQFMELIGNL KHTKRTGWVL RDVNDCESIS GHMYRMSMLT FLLDGSEGLN QIRCMELALV 240
  241 HDLAESLVGD ITPFCGISKD DKRAMEFKAM EDICKLIEPR GKRIMELFEE YEHGQTAESK 300
  301 FVKDLDRLDM VMQAFEYEKR DNCLLKHQEF FDSTEGKFNH PFVKKLVNEI YEQRDVLAKA 360
  361 KGATPPPAIE VPSMERSSKL ANGHDGSS

Type	Start	End	Confidence
Signal Peptide	1	32	0.84
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	388	0.99