YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG9550-PA
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSLSRTSKL TVACVGVYTT YVLFIFFLLP MLMPDPVTLQ RSLVSYSTSH LGDIRNLTLD  60
   61 AGGQPIRSML VTFRGSGALT LLDNLAHQPG CYQHYAPLIA YESRSIAAKE HHRALDELAA 120
  121 LYNCDYNKSA EMIQWGMRSP VFRRFYGAQA KICRSYSQEA CWDPETMAAV CKLYPFINMA 180
  181 VYNLRLNLLA SLLERKDLNL NIMLLVRDPR GTIYSRMNNK WCSDERDCEA QELCGDMVSD 240
  241 YQMVETLTQA YPQRFSIIRY EDLFLQPDES IKQVFDFYGL PLERNRTRIQ KMHPRSGYFF 300
  301 QSSRWKELSS QSAFEWISEM MVDDIGAVQD VCGQAMDLWG YRSIQDFNHF SPESFQPIMD 360
  361 KAY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle