YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Ugt37b1-PA
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.87
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGISRCLAL QIVVLIAGAH GANILGLFTS LSPSHLVIQM SMARILAERG HNVTVVTILK  60
   61 PPSLHKDINH ILVPMEEDIL QAFNSVVGGM TKTDNSNAYV SMFRSVRQLS ETFSKMGDVM 120
  121 KQPLVKDLYE HPDNKFDLVM VGYFMNCYQL ALAHKLKVPL VVALSNPPSF LGYLLGNPWE 180
  181 VSYVPGMSVS IKGGKPLGFG HRVLNLLGSM AQRLFMFIIE LRNARIYREI YGDDPTLPSY 240
  241 EDLHKNISLI FFASHGISEG PIRPNVPAVI EIGGIQVKEQ PERLPQNMEQ FLSEAPNGAI 300
  301 LLSLGSNLKE DHLKSSTVQK MFNVLSKLQQ KVIWKWDDLD NIPGESENIL YSKWVPQVDV 360
  361 LAHPNITLFI THAGKGGLTE AQYHGKPMLA LPVFGDQPSN ADVMVMHGFG IKQSILTLEE 420
  421 DSFLQGIREV LDNPKYATAV KSFSTLYRDR PLSPRETLIY WVEYVIRYHG APHIQSPVVH 480
  481 MSYIAANNLD VYAVILGTIV ALCFITKLLF GLVVGKLRKN SRKAKVNQKH KLKKKQS

Type	Start	End	Confidence
Signal Peptide	1	21	0.94
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	490	0.99
Transmembrane Helix	491	514	0.84
Cytoplasmic	515	537	0.89