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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: tectonic-PA
Protein type: Transmembrane
Type Confidence: 0.78
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEVHIIGQI LKAVDFAEPH LYCKWSLQSG NAWRLVQGEV QGQSHVASHR LQSSSDFAQP  60
   61 LDIHLSTASV QGWPRLLVEV YAVNVLQQSW PVGYGFVHVP STPGTHRLEI GTWKVAPNGL 120
  121 WQSLRERFGG GGAALSKTDL LYSVRRIRRG VQVAMKEVLP LVVLCLATYH THSIKIGISH 180
  181 NYNATISPTA STTTEAPATT GAPSSETVSS ISTLPEAEVT TTTPAITFPP RVQQKPKVAV 240
  241 ASPTMSTALP LNSTEVNSTL SVSGDNTFYY CSCDLQAGRC DLNCCCDNDC PLETRQVFNC 300
  301 LPNSLLPQLE SRLEDFQYTH GLPTCQINDG WLCVFRSNTK ATKTQPPDMN IDTSQYRKWK 360
  361 DNLEYQESDY AQSRPSAGHY KFGQTLQLWQ PETKQLATLE LPAAYESPNC QLKQSVWHLQ 420
  421 PIRHVCRMKD SAQLQESIWS LLNQTSNYEI LSKPRDLEEP EVNGLIVQVC LRGANKSMRC 480
  481 LERGNDTQLD VIVDHVELQL IHNFTNILEA KLFLEEAKLA EDDNEPLWLR YNVEFVTLNE 540
  541 SLTKPTSGPL GYLSGAPVIL SRMLPQNSSE DKQLISYHSL NQNIKEFHWL SLPSRKPRGS 600
  601 SCQRALDHKE ALRFGIDLLT RCELRHAAPL LQAHANHTEY CQGLQAQIWS LLLPHNCTQL 660
  661 EDVTKVFVSH LGRPQPDKWL PMEVRYPENV HEMPPPVQAV YDEMRQSLSC RNIFLSVGYE 720
  721 FHVAHLAMVE GRAPHQRVLQ HARLVLGQRH DLEFDTSEIE VALPLSISAM FYRMQTKALS 780
  781 NGAAVGIAGH LVLVEMIYLG IIYLGSMQLC L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle