YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Ucp4B-PA
Protein type:	Transmembrane
Type Confidence:	0.74
Topology Confidence:	0.38
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKGVNTVFR PAEWDNSEEK ERPKLEYLVT NKKTPPVELY LTAFASACSA EIVGYPFDMC  60
   61 KTRMQIQGEI ASRVGQKAKY RGLLATAMGI VREEGLLKLY GGISAMLFRH SLFSGIKMLT 120
  121 YDYMREKMIV PDEDGRPQLS FLGSCISGVL AGATASVLTN PTELIKIQMQ MEGQRRLRGE 180
  181 PPRIHNVLQA LTSIYRTGGV VGLWKGTVPN TWRSALVTIG DVSCYDFCKR FLIAEFDLVD 240
  241 NREVQFVAAM TAGVADAILS LPADVVKSRI MNQPTDEQGR GIHYKGSLDC LSRLVREEGF 300
  301 LAMYKGFIPY WMRVGPASVV FWMTFEQIRR FRGSEGY

Type	Start	End	Confidence
Cytoplasmic	1	95	0.55
Transmembrane Helix	96	113	0.38
Non-Cytoplasmic	114	337	0.56