YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|220959534, gi...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRSLCALRG QCQQLFRSSI RPQNSVHKSQ QFWRMKSTDS PEDAARKLRA KSTLYYITAG  60
   61 GVLIVGLSYA AVPLYSIFCQ AYSYGGTTTQ GHDAEKVEHM KKIEDRVLKI RFNADIGSSM 120
  121 RWNFKPQQYE IKVAPGETAL AFYTARNPTD KPVIGISTYN VIPFEAGAYF NKIQCFCFEE 180
  181 QQLNPHEEVD MPVFFYIDPE ITADPALETC DTITLSYTFF EAKEGLKLNF PSYAKPHAAS 240
  241 A

Type	Start	End	Confidence
Cytoplasmic	1	53	0.94
Transmembrane Helix	54	73	0.92
Non-Cytoplasmic	74	241	0.98