YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0297882, FBp...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPTDKGSLT AGRPQKSHCH GSVSVSDQQL LQHLHPHTHP RPVHLPPAHA THSPACEKRL  60
   61 EAETPRRDLH ELLLELLDMM MSCLVVAPCV IAYWRGTWEL MFVYLFPGSL PLSAMASFLI 120
  121 GGLGHFFFTV TQNFFKEHIH PDRRRLTYYA VSRLYTAVFG IVCVNMWRGA WLLCDWLTSV 180
  181 DSLIIVSVVT AIALIFLVAT RTLRNLGAAP YTVTMDHKSD YFEVDTMFKI PGFHQPGLYI 240
  241 LDTLFSVFVI GSLVVIAWRG VWGIFDLLLF PADKAKSAWG SLLIGYLTVF VTFLIHPLMR 300
  301 YVCRRISGIL KLIICDIYYL MTFFGAVNAW RGIWNLLDVY LYPDNKLLSF WLTHIVPFLL 360
  361 LAALKCSNSI LVRGVFIDAE GVGADSVDIP INYVRLHFLR ERRKKAGLQA TSQPPPPHYY 420
  421 LKPEHVSIGR NAEKDKEAQS SLIEKPHAAV QIV

Type	Start	End	Confidence
Cytoplasmic	1	75	0.98
Transmembrane Helix	76	94	0.97
Non-Cytoplasmic	95	109	0.77
Transmembrane Helix	110	130	0.91
Cytoplasmic	131	148	0.88
Transmembrane Helix	149	171	0.89
Non-Cytoplasmic	172	178	0.82
Transmembrane Helix	179	200	0.90
Cytoplasmic	201	237	0.96
Transmembrane Helix	238	261	0.89
Non-Cytoplasmic	262	277	0.92
Transmembrane Helix	278	298	0.92
Cytoplasmic	299	308	0.82
Transmembrane Helix	309	330	0.86
Non-Cytoplasmic	331	346	0.88
Transmembrane Helix	347	367	0.86
Cytoplasmic	368	453	0.97