YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0303005, CG1...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIRLRYGRR LQTYLKIGAC VLVGLCYFAF LFRESLNAYE HRERATAAEL EAESEPSKQQ  60
   61 LKLKRQQLQR QRILAKQQEQ GKGIAGGNAS AGSSSSQAAA PPPPPPATTL NPVYEYSEEL 120
  121 HSRTERELQR RSEHLAAVCD RYKLQEKYPP NPWEFFVSPG HNNLVWCNVF KAASSTWMYY 180
  181 FNILAGYDVK YLQRTETQPL ELARKRFPRP ELGELMELLP SALSFLFVRD PFERILSAYR 240
  241 NKLEGNKNTF YKALGNKIVH RYRKRNLGGP WPRCGPTFEE FVRFLIAEHA AGKRFDEHWA 300
  301 PVYSFCTPCS VNFTIIGKTE TFQRDSEFII RQAGLESLLL GLGKLPQRKQ RKIGNQARSG 360
  361 VKSEALVERY FADLDRSTLD QLLKIYRIDF ELFDYDYRRY YDMVHPWSLE QSTAASGGPA 420
  421 VASTSTTPSI SSGLAGQSTQ GQAT

Type	Start	End	Confidence
Cytoplasmic	1	12	0.89
Transmembrane Helix	13	32	0.90
Non-Cytoplasmic	33	444	0.99