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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: pgant5-PA
Protein type: Transmembrane
Type Confidence: 0.82
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFSTFTRKM RGRMRSNTCR IVLLTSLVWV IFDFVLIARY SDCIGKDGWR CKRSGEYDVE  60
   61 LPNAERLVDD NQLVDDNEIN TEKSLDGESG GALIMGQGFA SGGISMTYPS VVLKKWFLAP 120
  121 SVQEAKGKPG EMGKPVKIPA DMKDLMKEKF KENQFNLLAS DMISLNRSLT DVRHEGCRRK 180
  181 HYASKLPTTS IVIVFHNEAW TTLLRTVWSV INRSPRALLK EIILVDDASE RDFLGKQLEE 240
  241 YVAKLPVKTF VLRTEKRSGL IRARLLGAEH VSGEVITFLD AHCECTEGWL EPLLARIVQN 300
  301 RRTVVCPIID VISDETFEYI TASDSTWGGF NWKLNFRWYR VPSREMARRN NDRTAPLRTP 360
  361 TMAGGLFSID KDYFYEIGSY DEGMDIWGGE NLEMSFRIWQ CGGILEIIPC SHVGHVFRDK 420
  421 SPYTFPGGVA KIVLHNAARV AEVWLDEWRD FYYSMSTGAR KASAGDVSDR KALRDRLKCK 480
  481 SFRWYLENVY PESLMPLDYY YLGEIRNAET ETCLDTMGRK YNEKVGISYC HGLGGNQVFA 540
  541 YTKRQQIMSD DLCLDASSSN GPVNMVRCHN MGGNQEWVYD AEEKWIRHTN TGQCLQRATR 600
  601 DDANTPLLRP CSYGKGQQWL MESKFKWQAH 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle