YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Cg25C-PC, Cg25C-...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPFWKRLLY AAVIAGALVG ADAQFWKTAG TAGSIQDSVK HYNRNEPKFP IDDSYDIVDS  60
   61 AGVARGDLPP KNCTAGYAGC VPKCIAEKGN RGLPGPLGPT GLKGEMGFPG MEGPSGDKGQ 120
  121 KGDPGPYGQR GDKGERGSPG LHGQAGVPGV QGPAGNPGAP GINGKDGCDG QDGIPGLEGL 180
  181 SGMPGPRGYA GQLGSKGEKG EPAKENGDYA KGEKGEPGWR GTAGLAGPQG FPGEKGERGD 240
  241 SGPYGAKGPR GEHGLKGEKG ASCYGPMKPG APGIKGEKGE PASSFPVKPT HTVMGPRGDM 300
  301 GQKGEPGLVG RKGEPGPEGD TGLDGQKGEK GLPGGPGDRG RQGNFGPPGS TGQKGDRGEP 360
  361 GLNGLPGNPG QKGEPGRAGA TGKPGLLGPP GPPGGGRGTP GPPGPKGPRG YVGAPGPQGL 420
  421 NGVDGLPGPQ GYNGQKGGAG LPGRPGNEGP PGKKGEKGTA GLNGPKGSIG PIGHPGPPGP 480
  481 EGQKGDAGLP GYGIQGSKGD AGIPGYPGLK GSKGERGFKG NAGAPGDSKL GRPGTPGAAG 540
  541 APGQKGDAGR PGTPGQKGDM GIKGDVGGKC SSCRAGPKGD KGTSGLPGIP GKDGARGPPG 600
  601 ERGYPGERGH DGINGQTGPP GEKGEDGRTG LPGATGEPGK PALCDLSLIE PLKGDKGYPG 660
  661 APGAKGVQGF KGAEGLPGIP GPKGEFGFKG EKGLSGAPGN DGTPGRAGRD GYPGIPGQSI 720
  721 KGEPGFHGRD GAKGDKGSFG RSGEKGEPGS CALDEIKMPA KGNKGEPGQT GMPGPPGEDG 780
  781 SPGERGYTGL KGNTGPQGPP GVEGPRGLNG PRGEKGNQGA VGVPGNPGKD GLRGIPGRNG 840
  841 QPGPRGEPGI SRPGPMGPPG LNGLQGEKGD RGPTGPIGFP GADGSVGYPG DRGDAGLPGV 900
  901 SGRPGIVGEK GDVGPIGPAG VAGPPGVPGI DGVRGRDGAK GEPGSPGLVG MPGNKGDRGA 960
  961 PGNDGPKGFA GVTGAPGKRG PAGIPGVSGA KGDKGATGLT GNDGPVGGRG PPGAPGLMGI1020
 1021 KGDQGLAGAP GQQGLDGMPG EKGNQGFPGL DGPPGLPGDA SEKGQKGEPG PSGLRGDTGP1080
 1081 AGTPGWPGEK GLPGLAVHGR AGPPGEKGDQ GRSGIDGRDG INGEKGEQGL QGVWGQPGEK1140
 1141 GSVGAPGIPG APGMDGLPGA AGAPGAVGYP GDRGDKGEPG LSGLPGLKGE TGPVGLQGFT1200
 1201 GAPGPKGERG IRGQPGLPAT VPDIRGDKGS QGERGYTGEK GEQGERGLTG PAGVAGAKGD1260
 1261 RGLQGPPGAS GLNGIPGAKG DIGPRGEIGY PGVTIKGEKG LPGRPGRNGR QGLIGAPGLI1320
 1321 GERGLPGLAG EPGLVGLPGP IGPAGSKGER GLAGSPGQPG QDGFPGAPGL KGDTGPQGFK1380
 1381 GERGLNGFEG QKGDKGDRGL QGPSGLPGLV GQKGDTGYPG LNGNDGPVGA PGERGFTGPK1440
 1441 GRDGRDGTPG LPGQKGEPGM LPPPGPKGEP GQPGRNGPKG EPGRPGERGL IGIQGERGEK1500
 1501 GERGLIGETG NVGRPGPKGD RGEPGERGYE GAIGLIGQKG EPGAPAPAAL DYLTGILITR1560
 1561 HSQSETVPAC SAGHTELWTG YSLLYVDGND YAHNQDLGSP GSCVPRFSTL PVLSCGQNNV1620
 1621 CNYASRNDKT FWLTTNAAIP MMPVENIEIR QYISRCVVCE APANVIAVHS QTIEVPDCPN1680
 1681 GWEGLWIGYS FLMHTAVGNG GGGQALQSPG SCLEDFRATP FIECNGAKGT CHFYETMTSF1740
 1741 WMYNLESSQP FERPQQQTIK AGERQSHVSR CQVCMKNSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle