YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: vkg-PA, FBpp0305...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPRDLRHLS GLLGVVYLLG SLVSVTLADG KICNTTLCDC KGIKGRMGAP GPIGVPGLEG  60
   61 PAGDIGPPGR AGPLGEKGDV GEYGEQGEKG HRGDIGPKGE MGYPGIMGKS GEPGTPGPRG 120
  121 IDGCDGRPGM QGPSGAPGQN GVRGPPGKPG QQGPPGEAGE GGINSKGTKG NRGETGQPGG 180
  181 VGPPGFDGDR GSKGDTGYAG LTGEKGDPGL PGPKGDTGAV SELPYSLIGP PGAKGEPGDS 240
  241 LSGVLKPDDT LKGYKGYVGL QGDEGPQGPT GEQGAVGRNG LPGARGEIGG PGERGKPGKD 300
  301 GEPGRFGDKG MKGAPGWTGA DGLDGSPGER GEDGFTGMPG VQGGAGPPGI YDPSLTKSLP 360
  361 GPIGSQGDIG PPGEQGPPGL PGKPGRRGPI GLAGQSGDPG LNGSRGPPGR SERGEAGDYG 420
  421 FIGPPGPQGP PGEAGLPGRY GLHGEPGQNV VGPKGEPGLN GQPGLEGYRG DRGEVGLPGD 480
  481 KGLPGEGYNI VGPPGSQGPP GFRGLPGDDG YNGLRGLPGE KGLRGDDCPV CNAGPRGPRG 540
  541 QEGDTGYPGS HGNRGAIGLT GPRGVQGLQG NPGRAGHKGL PGPAGIPGEP GKVGAAGPDG 600
  601 KAIEVGSLRK GEIGDTGDSG HRGDTGDDGE KGRDGSDGSK GERGETGQRG DYGDAGYQGR 660
  661 DGEPGRDGRD GAPGRNATTP KVYLIGEPGY DGIKGERGDD GDTGFKGVKG EPNPGQIYDN 720
  721 TGEPGEDGYT GPKGVKGAKG EQGAIGLRGE IGDRGPAGEV IPGPVGAKGY PGPTGDYGQQ 780
  781 GAPGLPGRDG EPGLDGGIGY KGQRGVPGQE VIQGEIGPPG RSGIKGFPGD VGAPGQYGLA 840
  841 GRPGPKGVKG EQGPDGAVGQ TGLPGNKGQR GDFLVGPPGP KGQPGRNGRQ APHGAKGQKG 900
  901 EVGSLGQNGQ NGAKGSIGFS GRRGLLGNAG LQGLPGSPGI PGLPGMIGEI GERGEIGYNG 960
  961 RQGDIGPRGP NGEFGPKGLS GDDGPDGYPG ANGLPGRKGE TGNPGFPGRP GAKGVAAYSG1020
 1021 IKGDDGESGL TGPIGYPGAP GAKGQRGPVG DSQPALDGVA GRKGEVGSPG PNGLPGRHGL1080
 1081 KGQRGDRGLP GQQGRPGEPG AKGLGGYPGR NGINGLKGAT GFPGPQGPKG PQGESGVVGL1140
 1141 DGRNGQIGDQ GPRGLIGEQG EQGEQGDEGE VGIPGRLENL RDRSFYRGFT GDQGLQGERG1200
 1201 EQGDMGPIGF IGPPGAKGER GDIGYAGQLG FDGAEGLKGF QGDQGPRGPP GITLPAEKGD1260
 1261 EGVAGLDGRA GRPGHFGQKG APGPPGENGP NGAIGHRGPQ IQGPPGPQGD VGFPGAPGHN1320
 1321 GRHGLIGPKG ELGDMGRQGE RGESGYAIVG RQGDIGDIGF QGEPGWDGAK GEQGYPGLPG1380
 1381 KNGRVGAPGP RGPTGDAGWG GIDGMDGLVG PKGQPGVTYS YSMARPGDRG EPGLDGFQGE1440
 1441 EGDGGAPGLI GFQGQRGAVG YRGDQGEVGY TGADGPQGQR GDKGYMGLTG APGLRGLPGP1500
 1501 QGEPAPAPPA PKSRGFIFAR HSQSVHVPQC PANTNLLWEG YSLSGNVAAS RAVGQDLGQS1560
 1561 GSCMMRFTTM PYMLCDITNV CHFAQNNDDS LWLSTAEPMP MTMTPIQGRD LMKYISRCVV1620
 1621 CETTTRIIAL HSQSMSIPDC PGGWEEMWTG YSYFMSTLDN VGGVGQNLVS PGSCLEEFRA1680
 1681 QPVIECHGHG RCNYYDALAS FWLTVIEEQD QFVQPRQQTL KADFTSKISR CTVCRRRGNS1740
 1741 FVARTAKSRA DASSGFTDGS ASSNPSGSLK TDGNYRANWQ SGRSSSPGSQ SSPGSSSGSW1800
 1801 SSGSNAGAYP GSNAGAYSGS NAGAYPGSNA GAYPGSNAAW QSRTNAGSSW HSGPVAGSVS1860
 1861 NPGSYSSWST GSSPGSNPES NAGSTRSSWI TRSRGPSNYL NGRYQQRVHP SNLQAYDEYA1920
 1921 RHGGNTRQYN RRPREDTTAP 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle