YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FBpp0304684, FBp...
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.76
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERLTGRNVA LLVLCLCAGY ALVFAEGEKE IPVTKFGQNI APTMTFLYCY SCGYRKAFED  60
   61 YVGLLGEKYP QIQVNGGNYD PPGLNYYLSK MIFALKIIII VSVVSAVSPF TFLGLNTPSW 120
  121 WSHMQANKIY ACMMIFFLGN MLEAQLISSG AFEITLNDVP VWSKLQTGRF PSPEVLFQII 180
  181 DNHLQFTEKV QENPDFVK

Type	Start	End	Confidence
Signal Peptide	1	25	0.92
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	91	0.96
Transmembrane Helix	92	115	0.75
Cytoplasmic	116	128	0.66
Transmembrane Helix	129	147	0.67
Non-Cytoplasmic	148	198	0.84