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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ft-PA
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.93
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERLLLLFFL LLAGRESLCQ TGDTKLELLA PRGRSYATTY EQYAAFPRRR SSSSSPSGEM  60
   61 QSRAVDTSAD FEVLEGQPRG TTVGFIPTKP KFSYRFNEPP REFTLDPVTG EVKTNVVLDR 120
  121 EGMRDHYDLV VLSSQPTYPI EVRIKVLDVN DNSPEFPEPS IAISFSESAT SGTRLLLDAA 180
  181 TDADVGENGV TDQYEIVAGN VDNKFRLVTT ANPSGDTSYL HLETTGNLDR ESRGSYQLNI 240
  241 SARDGGSPPR FGYLQVNVTI LDVNDNPPIF DHSDYNVSLN ETALPGTPVV TVMASDNDLG 300
  301 DNSKITYYLA ETEHQFTVNP ETGVISTTER VNCPQQTNVK SSASQKSCVF TVFARDHGSP 360
  361 RQDGRTYVTV NLLDTNDHDP IISFRFFPDG GKVATVDENA VNGTVVAAVA VKDSDSGLNG 420
  421 RTSVRIVSGN ELGHFRLEEA ADLHIVRVNG VLDREEIGKY NLTVVAMDQG TPARTTTAHL 480
  481 IIDVNDVNDH EPVFEKSEYS AVLSELAPTG SFVASITATD EDTGVNAQVH YDILSGNELK 540
  541 WFSMDPLTGL IVTTGPLDRE IRDTVELSIS ARDGGPNPKF AYTQLKVIIL DENDEAPQFS 600
  601 QREQNVTLGE DAPPQTIVAL MTATDHDQGT NGSVTFALAP SVERLYPLQF ALDALTGQLT 660
  661 TRRPLDREKM SQYEISVIAR DQGAPTPQSA TATVWLNVAD VNDNDPQFYP RHYIYSLADD 720
  721 DDDIKLKKEV EKERILLHVT ASDKDDGDNA LIEYRLESGG EGLFQLDARS GAISLRGDAP 780
  781 ASMHWKPHYK LLVSARDAGQ RRSQQDAIVE IVLKSKLEML ECGQAQAGGY EFQMVEDHEQ 840
  841 QRNSQPNREV GIVQVKSTNG KANSHIEYDI IQGDRAQNFR IDTRSGRITT ARPLDREEQA 900
  901 NYRLTILASS SSSSSAAASS VSYGQCIVNI AIIDLNDNAP VFALDRESEP TISLPENAAV 960
  961 GQEIYLSRVR DRDAGVNSRI SYSLTNNPNQ QFRIGPVTGV LYLQRPIRAE PGSLIHVELM1020
 1021 ATDAGSPPLS SKLSLSVLIA DVNDHTPVFD HTSYETSLPE TTKVNTRFFA LAATDIDLGD1080
 1081 NGRISYEIIE GNTERMFGVF PDGYLFVRAP LDREERDYYA LTVSCRDAGQ PSRSSVVPVV1140
 1141 IHVIDENDNA PQFTNSTFTF SIPENAPADT FVGKLTAVDR DIGRNAELSF TLSSQTQDFT1200
 1201 IDTRNGFIKT LRPFDREALV KVSRNAEASG EDGSLRGSMA GNYMLLEATV SDNGIPRLQD1260
 1261 KVKVKVIVTD VNDNAPEFLR APYHVTISEG ASEGTHITHV FTQDADEGLN GDVYYSLAKG1320
 1321 NEAGQFNLDS ATGQLSLGRR LDRESQEIHH LIVVAKDAAL KHPLSSNASI TIVVLDENDN1380
 1381 APEFTQSSSE VSVLETSPTG TELMRFRASD ADQGVNSQVV FSISAGNRRD TFHIDSITGS1440
 1441 LYLHKPLDYE DITSYTLNIT ASDCGTPSLS TTVLYNVLVV DDNDNPPIFP STAIVRQIKE1500
 1501 GIPLKTPIVT VTADDPDSGL NGKVSYAISK QEPQLPQGRH FGINTETGVI HTLREIDRES1560
 1561 IDTFRLTVVA TDRAQPSERQ LSTEKLVTVI VEDINDNAPV FVSMNAAILP PKFSTSKGSS1620
 1621 TAVMQVHAKD ADSSSNGLVT YEIVSGPQEL FKLQRNTGII TFTPGPQFKQ EVRYQLTLKS1680
 1681 TDEAVQSERR SSEVYITIIT PGSGGSESSV PQFEQRSKLS GSVYENEPIG TSILTVTAHL1740
 1741 ASAEIEYFVT NVTATGSRGQ VDRLFDIDAK LGILSTAAEL DREAGPEEYE VEVYAIALGG1800
 1801 QPRTSRTKVR VTVLDKNDSP PQFLDTPFVY NVSEDLQIGH TISTLRAHDP DTLGSVTFLL1860
 1861 MDGHDGKFLL EPSTGKLILN DTLDRETKSK YELRIRVSDG VQYTEAYATI QVSDTNDNPP1920
 1921 LFEDTVYSFD IPENAQRGYQ VGQIVARDAD LGQNAQLSYG VVSDWANDVF SLNPQTGMLT1980
 1981 LTARLDYEEV QHYILIVQAQ DNGQPSLSTT ITVYCNVLDL NDNAPIFDPM SYSSEVFENV2040
 2041 PIATEVVTVS AKDIDSGNNG LIEYSITAGD VDSEFGIDSN GTIRTRRNLD REHRSTYTLT2100
 2101 VTARDCADEF ASFSELEETQ LKLKYRSPRK YQQTRQEFLA HQKQQRLSST VKVTILIKDV2160
 2161 NDEVPVFISA NETAIMENVA INTVVIAVKA VDNDEGRNGY IDYLMKEARD EDMGQSDPLP2220
 2221 FSLNPTDGQL RVVDALDREL RSSYLLNITA RDRGEPPQST ESQLLIRILD ENDNSPVFDP2280
 2281 KQYSASVAEN ASIGAMVLQV SATDVDEGAN GRIRYSIVLG DQNHDFSISE DTGVVRVAKN2340
 2341 LNYERLSRYS LTVRAEDCAL ENPAGDTAEL TINILDINDN RPTFLDSPYL ARVMENTVPP2400
 2401 NGGYVLTVNA YDADTPPLNS QVRYFLKEGD SDLFRINASS GDIALLKPLD REQQSEYTLT2460
 2461 LVAMDTGSPP LTGTGIVRVE VQDINDNDPV FELQSYHATV RENLPSGTHV LTPRATDKDE2520
 2521 GLNAKLRFNL LGEHMHRFHI DSETGEISTA TTLDREETSV YHLTLMAQDS SITEPRASSV2580
 2581 NLTISVSDVN DNIPKFDSTT YNVAVPERIS KGEFVFGARA LDLDDGENAV VHYTISGRDQ2640
 2641 HYFDINTKTG VVSTKLELKT KTKSHDDLTY TIVISAMDQG EQSLSSKAEL TVILRPPELF2700
 2701 PTFAYMANSH FAMSEDVRPG KMITKVSATS PKKGLVGKIR YAIAGGIMGD SLRVDPNSGL2760
 2761 LSVGQDGLDY ELTHLYEIWI EAADGDTPSL RSVTLITLNV TDANDNAPVM EQLIYNAEVL2820
 2821 EEESPPQLIA VVKASDRDSG DNGNVIYRLQ NDFDGTFEIT ESGEIYTRMR LDREEIGDYA2880
 2881 FVVEAVDQGV PHMTGTASVL LHLLDKNDNP PKFTRLFSLN VTENAEIGSF VIRVTSSDLD2940
 2941 LGANANASYS FSENPGEKFR IEPQSGNITV AGHLDREQQD EYILKVVASD GAWRAETPIT3000
 3001 ITIQDQNDNA PEFEHSFYSF SFPELQQSIA LVGQIIATDR DKQGPNSVIS YSLQQPSPMF3060
 3061 SIDPATGEVF SKKAVRFKHS QYVRSPENMY ALTVLATDNG KPPLYSECLV NINIVDAHNN3120
 3121 PPKFEQAEYL APLPQDAVRG QRIVRVHAND KQDLGTNEMD YSLMTFNLSS IFSVGRHDGW3180
 3181 ITLVKPIQVP PNTRYELVVR ATDRGVPPQS DETRVVIVVT GENMDTPRFS VNSYQVIVPE3240
 3241 NEPVGSTILT VGATDDDTGP NGMLRYSISG GNERQDFSVD ERTGGIVIQQ QLDYDLIQEY3300
 3301 HLNITVQDLG YHPLSSVAML TIILTDVNDN PPVFNHKEYH CYIPENKPVG TFVFQAHAAD3360
 3361 KDSPKNAIIH YAFLPSGPDR HFFIMNQSNG TISSAVSFDY EERRIYTLQI KAKNPDSSME3420
 3421 SYANLYVHVL GVNEFYPQFL QPVFHFDVSE TSAVGTRVGA VQATDKDSGE DGRVYYLLVG3480
 3481 SSNDKGFRID TNTGLIYVAR HLDRETQNRV VLTVMAKNYG SIRGNDTDEA QVIISIQDGN3540
 3541 DPPEFIKHYY TSTISEAAPV GTKVTTVKAI DKDVRTQNNQ FSYSIINGNL KQSFKIDVQT3600
 3601 GEISTASRLD REETSTYNLV IGAIDTGLPP QTGSATVHIE LEDVNDNGPT FTPEGLNGYI3660
 3661 SENEPAGTSI MTLIASDPDL PRNGGPFTYQ LIGGKHKSWL SVDRNSGVVR STTSFDREMT3720
 3721 PILEAIIEVE DSGKPKQKSQ HLLTITVLDQ NDNPSTTRSL HIAVSLFNGD LPSNVKLADV3780
 3781 RPNDIDIVGD YRCRLQKNPA QSQLQLAIPR ACDLITTSHT TPIASVFSYT GNDGKHGDVS3840
 3841 SKVSVAFQSF NNETLANSVS IMVRNMTAYH FLANHYRPIL EMIKSRMSNE DEVILYSLLE3900
 3901 GGSGNSTNLQ LLMAVRLAKT SYQQPKYLIE RLREKRSAFS ELLQKEVIVG YEPCSEPDVC3960
 3961 ENGGVCSATM RLLDAHSFVI QDSPALVLSG PRVVHDYSCQ CTSGFSGEQC SRRQDPCLPN4020
 4021 PCHSQVQCRR LGSDFQCMCP ANRDGKHCEK ERSDVCYSKP CRNGGSCQRS PDGSSYFCLC4080
 4081 RPGFRGNQCE SVSDSCRPNP CLHGGLCVSL KPGYKCNCTP GRYGRHCERF SYGFQPLSYM4140
 4141 TFPALDVTTN DISIVFATTK PNSLLLYNYG MQSGGRSDFL AIELVHGRAY FSSGGARTAI4200
 4201 STVIAGRNLA DGGWHKVTAT RNGRVMSLSV AKCADSGDVC TECLPGDSSC YADEVGPVGT4260
 4261 LNFNKQPLMI GGLSSADPIL ERPGQVHSDD LVGCLHSVHI GGRALNLSLP LQQKGILAGC4320
 4321 NRQACQPALA AERCGGFAGQ CIDRWSSSLC QCGGHLQSPD CSDSLEPITL GEGAFVEFRI4380
 4381 SEIYRRMQLL DNLYNSKSAW LDNQQMRERR AVSNFSTASQ IYEAPKMLSM LFRTYKDQGQ4440
 4441 ILYAATNQMF TSLSLREGRL VYYSKQHLTI NMTVQETSTL NDGKWHNVSL FSESRSLRLI4500
 4501 VDGRQVGDEL DIAGVHDFLD PYLTILNVGG EAFVGCLANV TVNNELQPLN GSGSIFPEVR4560
 4561 YHGKIESGCR GDIGQDAAQV ADPLSIGFTL VIVFFVILVV AILGSYVIYR FRGKQEKIGS4620
 4621 LSCGVPGFKI KHPGGPVTQS QVDHVLVRNL HPSEAPSPPV GAGDHMRPPV GSHHLVGPEL4680
 4681 LTKKFKEPTA EMPQPQQQQQ RPQRPDIIER ESPLIREDHH LPIPPLHPLP LEHASSVDMG4740
 4741 SEYPEHYDLE NASSIAPSDI DIVYHYKGYR EAAGLRKYKA SVPPVSAYTH HKHQNSGSQQ4800
 4801 QQQQHRHTAP FVTRNQGGQP PPPPTSASRT HQSTPLARLS PSSELSSQQP RILTLHDISG4860
 4861 KPLQSALLAT TSSSGGVGKD VHSNSERSLN SPVMSQLSGQ SSSASRQKPG VPQQQAQQTS4920
 4921 MGLTAEEIER LNGRPRTCSL ISTLDAVSSS SEAPRVSSSA LHMSLGGDVD AHSSTSTDES4980
 4981 GNDSFTCSEI EYDNNSLSGD GKYSTSKSLL DGRSPVSRAL SGGETSRNPP TTVVKTPPIP5040
 5041 PHAYDGFESS FRGSLSTLVA SDDDIANHLS GIYRKANGAA SPSATTLGWE YLLNWGPSYE5100
 5101 NLMGVFKDIA ELPDTNGPSQ QQQQQTQVVS TLRMPSSNGP AAPEEYV

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