YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	lectin-24Db-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRLEKCIVY LLVACNLVES RAESTENSRS VCLLKDPPNQ CGEFCLSVLQ PLLDHIVKHQ  60
   61 EQWNTSEALW LNETQGKLDR IQTQLAAQAL SLEESAQKVP GDIKDRLDRM EHLQTTLQES 120
  121 LKKMPAELDA RLMKMENQQK TLGDQLENQI NLTKESQQDQ LEALKNAMPI NFEMRLAQIE 180
  181 EQQKLLQETL KKIPEDFERK LQKLEQNQKD ELTKLGAQQS ANQVTLKEIY TKVFWPKFER 240
  241 IGSRLFYINH KDAYDWQSAV DFCRDMGGYI AAIKDQEELD AISARLDDKS YWLGINDLQS 300
  301 SNTYVSVASG REVEFLNWNA GEPNHGNEDE NCVELIRSKM NDDPCHRKKH VICQTDKEV

Type	Start	End	Confidence
Signal Peptide	1	22	0.89
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	359	0.99