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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: capu-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALQLGKKLA QVLGSGAGSP LTPGTMEPCA AGSGSPLANG ELFNVSKAKK VELQNLSSRF  60
   61 TAAVTQTPPG VTSSTPNESG VTGPAGPLGA TTSSPSLETQ STVIISFKSS QTPVQSQTNS 120
  121 AASENVEDDT APLPLPPPPP GFGTPTTPLL SSNVLKKVAS FTVEKSSAGN NSSNPPNLCP 180
  181 TSDETTLLAT PCSSSLTVAT LPPEIAVGAA AGGVAGGAGS RRGSSYVPEK LSFAAYEKFE 240
  241 GQMLIKWLIS TMQSNPKSSS GDANQELFNT LALQFCNNLK YVGVLKQISN EHLDCGFSPY 300
  301 EMYQWTHTEQ PTTSLPLTPG KLDKVAAWPF SSTPSGIRAL ESASLASLGA GGVAGSLATI 360
  361 ATASTASSDN QKTLQQILKK RLLNCTTLAE VHAVVNELLS SVDEPPRRPS KRCVNLTELL 420
  421 NASEATVYEY NKTGAEGCVK SFTDAETQTE SEDCEGTCKC GQSSTKVSDN ESAKEDGEKP 480
  481 HAVAPPPPPP PPPLHAFVAP PPPPPPPPPP PPPLANYGAP PPPPPPPPGS GSAPPPPPPA 540
  541 PIEGGGGIPP PPPPMSASPS KTTISPAPLP DPAEGNWFHR TNTMRKSAVN PPKPMRPLYW 600
  601 TRIVTSAPPA PRPPSVANST DSTENSGSSP DEPPAANGAD APPTAPPATK EIWTEIEETP 660
  661 LDNIDEFTEL FSRQAIAPVS KPKELKVKRA KSIKVLDPER SRNVGIIWRS LHVPSSEIEH 720
  721 AIYHIDTSVV SLEALQHMSN IQATEDELQR IKEAAGGDIP LDHPEQFLLD ISLISMASER 780
  781 ISCIVFQAEF EESVTLLFRK LETVSQLSQQ LIESEDLKLV FSIILTLGNY MNGGNRQRGQ 840
  841 ADGFNLDILG KLKDVKSKES HTTLLHFIVR TYIAQRRKEG VHPLEIRLPI PEPADVERAA 900
  901 QMDFEEVQQQ IFDLNKKFLG CKRTTAKVLA ASRPEIMEPF KSKMEEFVEG ADKSMAKLHQ 960
  961 SLDECRDLFL ETMRFYHFSP KACTLTLAQC TPDQFFEYWT NFTNDFKDIW KKEITSLLNE1020
 1021 LMKKSKQAQI ESRRNVSTKV EKSGRISLKE RMLMRRSKN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle