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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: sob-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAVKHLSAA AAAAAAAATC SDSPAKAAAS PAASSDIAEA LGELKASATA AASSASKAAT  60
   61 SKHHSNNNHK PSAAATATAA HKKSESCNSN GNKCTAATSP IGSKTSNAAM AAATATAAAA 120
  121 TNDLAAAAAV VLSLQGTMVS SLQQAALLPA NSAAAAALNL QALESYLALQ RLTGKSDVFR 180
  181 FSNSNTGSSN SNNATTCNSS SSEADNNALP SLIDIANIEL KSSCSSSSSG EPPLTAATAS 240
  241 AAATSSPSSN NSNSTSTPTT SKCVPLPSIG TVSAAVAAAA AAAAAAASQQ AALDCATAAE 300
  301 LAAECDLPLL DGEDALSFEA GDLDSSYGSF MFNPSAFSQA ETDSALHSLQ ATMYQDKMSV 360
  361 ISGAAGGVGA GAVGGLEEAG SSAAAAAAQR SKKQFICKFC NRQFTKSYNL LIHERTHTDE 420
  421 RPYSCDICGK AFRRQDHLRD HRYIHSKEKP FKCAECGKGF CQSRTLAVHK ILHMEESPHK 480
  481 CPVCNRSFNQ RSNLKTHLLT HTDIKPYNCA SCGKVFRRNC DLRRHSLTHN LSAGVGGVVG 540
  541 GNLSDPFGSG SSSSSELGLP TGSASTAASS RDLVAVSD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle