YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: E23-PB
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGPSGSGKTT LLDCLSGQRH IDSGSVFLNR EPLTKKWRRR IGYVLQEEIF FPQLTLRETV  60
   61 VYTALLRLPE SMPRAEKMRQ VDHILEALEL GCCQQTKFGD YLNRGLSGGE KKRANIACEL 120
  121 LTNPLLMLLD EPTSGLDSHS AISLMKVLKR YAQLEQKTIV ISVHQPSSQM FHMFDKLLLL 180
  181 HQGRTAYFGD VQNIYRHFED IGVTIKPHYN PADFVLEQLK SHPDIREKLF IAAKESHGNY 240
  241 LNRNCITSSH HNQVSVSGAK GKKQADSILI DDIINNYYNQ RSNRHHHQYE NLHHTSNGCR 300
  301 VEEDEEAAQH LVWCAADSQS NFSSCASSDC HSYSAGSGPG HSADDDWLSY PTSFHTQFCV 360
  361 LSSRNFREAK PRMLSKLNWF QTIGLALMAG AIWFQLPRTE EFLHDLQGWM FFSQTYWMLF 420
  421 ALFGALNSFP SEREVVSKER RSGAYRLSAY YLAKMCAELP LVITLPTVYL MISYPMLGCT 480
  481 SLKLFFLMLI FLLINTIVAQ SVGFFIGACC MDMNVSITLS ALYTLATQLF GGYLSSRIPE 540
  541 GLSWIRYTSM IHYAYQNMQI LEFREGAAIG CGSPSSYEIC KQQSTEFIPY EEILKAQNST 600
  601 SPLWLNTLIL MMFFLVFRCL GYAVLRFLRC PKKT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle