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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: E23-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPMNLMIVES VEAVDMGSSD NDNETTEQVP LVSASRRNLA KIVADCRLQI EVEPATSAVA  60
   61 AAAAAAASVA SPPATSDATA ATSVASSDSS ASSSASSTSS SSSSSTSSEF THTSQTTIPS 120
  121 TDNLTSSNGL ANIGKSILVD AKSNSPASLS YHFEKSAAAN QQKQHHNINI CNSHHPHHHS 180
  181 QNQPQHSLQL TFQNLNVLHN ERQILSDVSG FVSPCEVLAI MGPSGSGKTT LLDCLSGQRH 240
  241 IDSGSVFLNR EPLTKKWRRR IGYVLQEEIF FPQLTLRETV VYTALLRLPE SMPRAEKMRQ 300
  301 VDHILEALEL GCCQQTKFGD YLNRGLSGGE KKRANIACEL LTNPLLMLLD EPTSGLDSHS 360
  361 AISLMKVLKR YAQLEQKTIV ISVHQPSSQM FHMFDKLLLL HQGRTAYFGD VQNIYRHFED 420
  421 IGVTIKPHYN PADFVLEQLK SHPDIREKLF IAAKESHGNY LNRNCITSSH HNQVSVSGAK 480
  481 GKKQADSILI DDIINNYYNQ RSNRHHHQYE NLHHTSNGCR VEEDEEAAQH LVWCAADSQS 540
  541 NFSSCASSDC HSYSAGSGPG HSADDDWLSY PTSFHTQFCV LSSRNFREAK PRMLSKLNWF 600
  601 QTIGLALMAG AIWFQLPRTE EFLHDLQGWM FFSQTYWMLF ALFGALNSFP SEREVVSKER 660
  661 RSGAYRLSAY YLAKMCAELP LVITLPTVYL MISYPMLGCT SLKLFFLMLI FLLINTIVAQ 720
  721 SVGFFIGACC MDMNVSITLS ALYTLATQLF GGYLSSRIPE GLSWIRYTSM IHYAYQNMQI 780
  781 LEFREGAAIG CGSPSSYEIC KQQSTEFIPY EEILKAQNST SPLWLNTLIL MMFFLVFRCL 840
  841 GYAVLRFLRC PKKT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle