YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	alpha4GT1-PA
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLWLPIAVA RRMFIILVLM VIGGLFYIYT SENKYHSCFM EGQVLATQQA LTADGETNLL  60
   61 GDVLQADPKP SPGNSIFFHE TSCRLSENRQ LETLKVTARQ ACAIESAAMH NPNFQVFVLF 120
  121 AGPTYRISNN KSHPQPLLEA ILSYSNVHLR RLNLESYASG TPMEEWLKDG RLSRSKYLFS 180
  181 HISDFLRYLT LYRYGGLYLD MDVVVLRNME KVPPNYTGAE SNTHLAAGVM NLAATGFGHE 240
  241 IAASCLRDFQ HNFNGGDWGN NGPGVITRVA QKICGTKDIA LMREDPKRCM GFKVFGRGAF 300
  301 YAVPWKQWRD FFEPENLEET IARCKDSYVV HVWNKHSSKL PIKIGSKNAY ALYAEQNCPR 360
  361 SYKAAGEYF

Type	Start	End	Confidence
Cytoplasmic	1	8	0.89
Transmembrane Helix	9	30	0.90
Non-Cytoplasmic	31	369	0.94