YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG2975-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVRPNRKRL ELMLMLLIGL AWGILLSELM KRTRWQNHAD RLKEESSPFP SSQRSRNLRT  60
   61 PPTIAPSTTN PPPDILAARL FNETRVLCMV LTSPKTHHTR AIHIKRTWGR RCNKLIFMST 120
  121 KADKELGSVA LNVREGYSNL WPKTRAALQY VYKHHFQKYD WFLKADDDTY FIMENLRAFL 180
  181 HAHNFREPVY FGNKFRQHVK EGYMSGGAGY VLSKMALHRL IKLGFSNSSI CTNRNYGYED 240
  241 VELGRCLAGV GVVGGDSRDE QGLSRFIPFS PLHWYPQPPD WYQPLLYYTS PDNSSDCCSN 300
  301 TAISFHYNNA QEFYVLEYII YKLRIFGINR ELGPLPKKKA SSRPMSINLQ TTKEENGHIA 360
  361 LIKMMPRKNV TTPNYRTKTT SKFKK

Type	Start	End	Confidence
Signal Peptide	1	27	0.72
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	385	0.99