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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24581239, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYSQTEKQRY DGWYNNLAHP DWGSVDSHLV RKAPPSYSDG VYAMAGANRP STRRLSRLFM  60
   61 RGKDGLGSKF NRTALLAFFG QLVANEIVMA SESGCPIEMH RIEIEKCDEM YDRECRGDKY 120
  121 IPFHRAAYDR DTGQSPNAPR EQINQMTAWI DGSFIYSTSE AWLNAMRSFH NGTLLTEKDG 180
  181 KLPVRNTMRV PLFNNPVPSV MKMLSPERLF LLGDPRTNQN PAILSFAILF LRWHNTLAQR 240
  241 IKRVHPDWSD EDIYQRARHT VIASLQNVIV YEYLPAFLGT SLPPYEGYKQ DIHPGIGHIF 300
  301 QAAAFRFGHT MIPPGIYRRD GQCNFKETPM GYPAVRLCST WWDSSGFFAD TSVEEVLMGL 360
  361 ASQISEREDP VLCSDVRDKL FGPMEFTRRD LGALNIMRGR DNGLPDYNTA RESYGLKRHK 420
  421 TWTDINPPLF ETQPELLDML KEAYDNKLDD VDVYVGGMLE SYGQPGEFFT AVIKEQFQRL 480
  481 RDADRFWFEN ERNGIFTPEE IAELRKITLW DIIVNSTDVK EEEIQKDVFM WRTGDPCPQP 540
  541 MQLNATELEP CTYLEGYDYF SGSELMFIYV CVFLGFVPIL CAGAGYCVVK LQNSKRRRLK 600
  601 IRQEALRAPQ HKGSVDKMLA REWLHANHKR LVTVKFGPEA AIYTVDRKGE KLRTFSLKHI 660
  661 DVVSVEESAT NHIKKKPYIL LRVPSDHDLV LELESYGARR KFVKKLEDFL LLHKKEMTLM 720
  721 EVNRDIMLAR AETRERRQKR LEYFFREAYA LTFGLRPGER RRRSDASSDG EVMTVMRTSL 780
  781 SKAEFAAALG MKPNDMFVRK MFNIVDKDQD GRISFQEFLE TVVLFSRGKT DDKLRIIFDM 840
  841 CDNDRNGVID KGELSEMMRS LVEIARTTSL GDDQVTELID GMFQDVGLEH KNHLTYQDFK 900
  901 LMMKEYKGDF VAIGLDCKGA KQNFLDTSTN VARMTSFNIE PMQDKPRHWL LAKWDAYITF 960
  961 LEENRQNIFY LFLFYVVTIV LFVERFIHYS FMAEHTDLRH IMGVGIAITR GSAASLSFCY1020
 1021 SLLLLTMSRN LITKLKEFPI QQYIPLDSHI QFHKIAACTA LFFSVLHTVG HIVNFYHVST1080
 1081 QSHENLRCLT REVHFASDYK PDITFWLFQT VTGTTGVMLF IIMCIIFVFA HPTIRKKAYN1140
 1141 FFWNMHTLYI GLYLLSLIHG LARLTGPPRF WMFFLGPGIV YTLDKIVSLR TKYMALDVID1200
 1201 TDLLPSDVIK IKFYRPPNLK YLSGQWVRLS CTAFRPHEMH SFTLTSAPHE NFLSCHIKAQ1260
 1261 GPWTWKLRNY FDPCNYNPED QPKIRIEGPF GGGNQDWYKF EVAVMVGGGI GVTPYASILN1320
 1321 DLVFGTSTNR YSGVACKKVY FLWICPSHKH FEWFIDVLRD VEKKDVTNVL EIHIFITQFF1380
 1381 HKFDLRTTML YICENHFQRL SKTSIFTGLK AVNHFGRPDM SSFLKFVQKK HSYVSKIGVF1440
 1441 SCGPRPLTKS VMSACDEVNK TRKLPYFIHH FENFG

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