YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG32463-PA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRKWQLLGL GFVLGVTALC ASFVGGMYFQ HTDARKRLRE LIQTDPYAYY LSPKIYEVFT  60
   61 FFESNNEDDH RMRQIMKFGF PGLDDLRLYS DFVLSYDRRN RVAHWVCEHL QADSIHPNRG 120
  121 RRGRNPYQPD LSVPSNFRSE LSDYRRSGFD RGHLAAAGNH HLQQNHCEDT FFLTNIAPQV 180
  181 GQGFNRSAWN NLEQYVRNLV HRFGSVFVCT GPLYKPNQRP GGKWAVEYEM IGLNMVAVPT 240
  241 HFFKVIMVES KLHLGKPYME GYVLPNAPIP DGLPLRSFLC DIREIEHYAG LKFFDGLRRS 300
  301 ALFGSNYPSE SRVFREFS

Type	Start	End	Confidence
Signal Peptide	1	20	0.66
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	318	0.93