YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	Gr22e-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRPSGSGYR QKWTGLTLKG ALYGSWILGV FPFAYDSWTR TLRRSKWLIA YGFVLNAAFI  60
   61 LLVVTNDTES ETPLRMEVFH RNALAEQING IHDIQSLSMV SIMLLRSFWK SGDIERTLNE 120
  121 LEDLQHRYFR NYSLEECISF DRFVLYKGFS VVLELVSMLV LELGMSPNYS AQFFIGLGSL 180
  181 CLMLLAVLLG ASHFHLAVVF VYRYVWIVNR ELLKLVNKMA IGETVESERM DLLLYLYHRL 240
  241 LDLGQRLASI YDYQMVMVMV SFLIANVLGI YFFIIYSISL NKSLDFKILV FVQALVINML 300
  301 DFWLNVEICE LAERTGRQTS TILKLFNDIE NIDEKLERSI TDFALFCSHR RLRFHHCGLF 360
  361 YVNYEMGFRM AITSFLYLLF LIQFDYWNL

Type	Start	End	Confidence
Cytoplasmic	1	14	0.63
Transmembrane Helix	15	35	0.85
Non-Cytoplasmic	36	46	0.52
Transmembrane Helix	47	66	0.93
Cytoplasmic	67	142	0.72
Transmembrane Helix	143	165	0.68
Non-Cytoplasmic	166	172	0.60
Transmembrane Helix	173	197	0.86
Cytoplasmic	198	254	0.65
Transmembrane Helix	255	276	0.92
Non-Cytoplasmic	277	285	0.57
Transmembrane Helix	286	304	0.66
Cytoplasmic	305	359	0.84
Transmembrane Helix	360	381	0.84
Non-Cytoplasmic	382	389	0.71