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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PNUTS-PC
Protein type: Transmembrane
Type Confidence: 0.68
Topology Confidence: 0.42
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKYSKKLVS KCVYVQILKS TKTELLGDFM AVGGWSLVYT WLNDAIRAMN WPLVQEILEL  60
   61 LLLSPVDVNR LKINSAPILV KGLCKDGGNE GVRILAKRLV EQWLKIVTEN TSMTIQGAAP 120
  121 HIAATTASQV PASVSGAGSA SVPDSASSSD STDSAGAPVT YTITSAANSS NSNSITIKWK 180
  181 PLLDNPDGGD ETDSGTQSKD NEVEHLEKGS SATHLLADAS LGKKSGLDDS SSAAEVKSGE 240
  241 DVDNKKHKSS KSDKSKRSEK EREKDRKKES SSHRSSSSSH KSSSSSSSSS SKSSSSKSSS 300
  301 SSSSSHRSSS DKYRDKDKAR SSSGSSSSSK DRERSSGSSS SSSNKHKSSK SSSSSSSSSS 360
  361 SSSGSSSSKD RKSSSSTSSS SSSSRQDKDK DNKLMPPPAV AASNAAGTSP TASAKESDAQ 420
  421 KPRSIPIMSR KASISIEIRR DTEKTATVKT YQSKFRSHGL TEEAPPPPSR KGLKKPTSSA 480
  481 VAASPALMAV PSSLKRPSPP PRDLSTDKKA KIDINNVAGH VERPGAAKLI APKKSKQQML 540
  541 ESLLMLFSIL FHSPRTLVAF AFVFDRSRMS NSAVLFVDLH SILKVFNFAW GGS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle